Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC8.77□□□□□ -1.01
ERCC3P19447 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC8.77□□□□□ -1.01
ERCC3P19447 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC8.77□□□□□ -1.01
ERCC3P19447 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC8.77□□□□□ -1.01
ERCC3P19447 AC006967.3-201ENST00000594086 1093 ntBASIC8.77□□□□□ -1.01
ERCC3P19447 RPS11-202ENST00000594493 575 ntTSL 3 BASIC8.77□□□□□ -1.01
ERCC3P19447 ANKRD20A19P-203ENST00000602724 295 ntBASIC8.77□□□□□ -1.01
ERCC3P19447 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC8.77□□□□□ -1.01
ERCC3P19447 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC8.77□□□□□ -1.01
ERCC3P19447 AC124319.3-201ENST00000616832 526 ntBASIC8.77□□□□□ -1.01
ERCC3P19447 AC084824.4-201ENST00000620106 731 ntBASIC8.77□□□□□ -1.01
ERCC3P19447 AC007347.2-201ENST00000623044 180 ntBASIC8.77□□□□□ -1.01
ERCC3P19447 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC8.77□□□□□ -1.01
ERCC3P19447 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC8.77□□□□□ -1.01
ERCC3P19447 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
ERCC3P19447 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
ERCC3P19447 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
ERCC3P19447 TRIM60P14-201ENST00000513444 1419 ntBASIC8.77□□□□□ -1.01
ERCC3P19447 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC8.77□□□□□ -1.01
ERCC3P19447 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
ERCC3P19447 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC8.77□□□□□ -1.01
ERCC3P19447 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
ERCC3P19447 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC8.77□□□□□ -1.01
ERCC3P19447 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1.01
ERCC3P19447 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
ERCC3P19447 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC8.77□□□□□ -1.01
ERCC3P19447 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
ERCC3P19447 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
ERCC3P19447 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
ERCC3P19447 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ERCC3P19447 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
ERCC3P19447 GRIA2-201ENST00000264426 3445 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ERCC3P19447 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ERCC3P19447 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ERCC3P19447 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
ERCC3P19447 AC005261.6-201ENST00000623072 1387 ntBASIC8.76□□□□□ -1.01
ERCC3P19447 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ERCC3P19447 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ERCC3P19447 RAD1P1-201ENST00000231383 813 ntBASIC8.76□□□□□ -1.01
ERCC3P19447 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ERCC3P19447 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
ERCC3P19447 AF228730.1-201ENST00000397972 663 ntBASIC8.76□□□□□ -1.01
ERCC3P19447 U3.31-201ENST00000408113 216 ntBASIC8.76□□□□□ -1.01
ERCC3P19447 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC8.76□□□□□ -1.01
ERCC3P19447 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC8.76□□□□□ -1.01
ERCC3P19447 PPIAP23-201ENST00000420099 497 ntBASIC8.76□□□□□ -1.01
ERCC3P19447 RNF11P2-201ENST00000427702 440 ntBASIC8.76□□□□□ -1.01
ERCC3P19447 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC8.76□□□□□ -1.01
ERCC3P19447 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC8.76□□□□□ -1.01
ERCC3P19447 RNFT1P2-201ENST00000443064 757 ntBASIC8.76□□□□□ -1.01
ERCC3P19447 MTCYBP21-201ENST00000443300 1113 ntBASIC8.76□□□□□ -1.01
ERCC3P19447 RPL7P55-201ENST00000450522 746 ntBASIC8.76□□□□□ -1.01
ERCC3P19447 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC8.76□□□□□ -1.01
ERCC3P19447 AC068587.2-201ENST00000478386 781 ntBASIC8.76□□□□□ -1.01
ERCC3P19447 RPS3AP15-201ENST00000483874 781 ntBASIC8.76□□□□□ -1.01
ERCC3P19447 AC105233.1-201ENST00000498840 781 ntBASIC8.76□□□□□ -1.01
ERCC3P19447 AC090835.1-201ENST00000515189 1024 ntBASIC8.76□□□□□ -1.01
ERCC3P19447 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC8.76□□□□□ -1.01
ERCC3P19447 OR4C1P-201ENST00000530880 937 ntBASIC8.76□□□□□ -1.01
ERCC3P19447 AC068631.3-201ENST00000538831 225 ntBASIC8.76□□□□□ -1.01
ERCC3P19447 DCN-215ENST00000550099 719 ntTSL 2 BASIC8.76□□□□□ -1.01
ERCC3P19447 AC090666.1-201ENST00000578241 445 ntBASIC8.76□□□□□ -1.01
ERCC3P19447 AC005726.4-201ENST00000582858 458 ntBASIC8.76□□□□□ -1.01
ERCC3P19447 MTCO2P2-201ENST00000591258 225 ntBASIC8.76□□□□□ -1.01
ERCC3P19447 AL445435.1-201ENST00000604232 665 ntBASIC8.76□□□□□ -1.01
ERCC3P19447 AC012510.1-201ENST00000607946 759 ntBASIC8.76□□□□□ -1.01
ERCC3P19447 AC109587.1-213ENST00000610844 652 ntTSL 5 BASIC8.76□□□□□ -1.01
ERCC3P19447 AC087683.2-201ENST00000611384 326 ntBASIC8.76□□□□□ -1.01
ERCC3P19447 AL139123.1-201ENST00000612008 430 ntBASIC8.76□□□□□ -1.01
ERCC3P19447 AC005609.2-201ENST00000623320 592 ntBASIC8.76□□□□□ -1.01
ERCC3P19447 AL590396.4-201ENST00000636779 956 ntBASIC8.76□□□□□ -1.01
ERCC3P19447 AC087269.2-201ENST00000641764 975 ntBASIC8.76□□□□□ -1.01
ERCC3P19447 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
ERCC3P19447 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
ERCC3P19447 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ERCC3P19447 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC8.76□□□□□ -1.01
ERCC3P19447 AC087045.3-201ENST00000623046 2468 ntBASIC8.76□□□□□ -1.01
ERCC3P19447 NEK2P2-201ENST00000438441 1338 ntBASIC8.76□□□□□ -1.01
ERCC3P19447 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ERCC3P19447 MTCO1P25-201ENST00000414449 1799 ntBASIC8.76□□□□□ -1.01
ERCC3P19447 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
ERCC3P19447 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
ERCC3P19447 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
ERCC3P19447 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
ERCC3P19447 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
ERCC3P19447 OR7E25P-202ENST00000641088 5937 ntBASIC8.75□□□□□ -1.01
ERCC3P19447 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC8.75□□□□□ -1.01
ERCC3P19447 AC104964.2-201ENST00000562242 4641 ntBASIC8.75□□□□□ -1.01
ERCC3P19447 AL049634.1-201ENST00000453770 1720 ntBASIC8.75□□□□□ -1.01
ERCC3P19447 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
ERCC3P19447 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
ERCC3P19447 AC006058.1-201ENST00000568686 5067 ntBASIC8.75□□□□□ -1.01
ERCC3P19447 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
ERCC3P19447 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
ERCC3P19447 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
ERCC3P19447 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC8.75□□□□□ -1.01
ERCC3P19447 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC8.75□□□□□ -1.01
ERCC3P19447 SNORA11D-201ENST00000408548 128 ntBASIC8.75□□□□□ -1.01
ERCC3P19447 SNORA11E-201ENST00000408778 128 ntBASIC8.75□□□□□ -1.01
ERCC3P19447 BCRP8-201ENST00000412037 255 ntBASIC8.75□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms