Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC7.35□□□□□ -1.23
COL6A2P12110 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.35□□□□□ -1.23
COL6A2P12110 AL449283.1-201ENST00000602631 3403 ntBASIC7.34□□□□□ -1.23
COL6A2P12110 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
COL6A2P12110 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL6A2P12110 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL6A2P12110 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL6A2P12110 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL6A2P12110 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL6A2P12110 UBE2U-206ENST00000611228 1550 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
COL6A2P12110 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC7.34□□□□□ -1.23
COL6A2P12110 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL6A2P12110 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
COL6A2P12110 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
COL6A2P12110 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
COL6A2P12110 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL6A2P12110 RNU1-38P-201ENST00000362817 144 ntBASIC7.34□□□□□ -1.23
COL6A2P12110 RNA5SP79-201ENST00000365193 109 ntBASIC7.34□□□□□ -1.23
COL6A2P12110 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC7.34□□□□□ -1.23
COL6A2P12110 RAN-201ENST00000392367 780 ntTSL 5 BASIC7.34□□□□□ -1.23
COL6A2P12110 CES5AP1-201ENST00000400418 859 ntBASIC7.34□□□□□ -1.23
COL6A2P12110 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC7.34□□□□□ -1.23
COL6A2P12110 CTSLP8-201ENST00000413075 967 ntBASIC7.34□□□□□ -1.23
COL6A2P12110 LINC01424-201ENST00000417820 1031 ntTSL 2 BASIC7.34□□□□□ -1.23
COL6A2P12110 TRBV30-201ENST00000417977 447 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
COL6A2P12110 RCC2P2-201ENST00000422174 918 ntBASIC7.34□□□□□ -1.23
COL6A2P12110 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7.34□□□□□ -1.23
COL6A2P12110 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
COL6A2P12110 DDX11L10-201ENST00000430178 571 ntBASIC7.34□□□□□ -1.23
COL6A2P12110 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC7.34□□□□□ -1.23
COL6A2P12110 EIF3IP1-201ENST00000433048 967 ntBASIC7.34□□□□□ -1.23
COL6A2P12110 AL450384.2-202ENST00000436485 656 ntTSL 3 BASIC7.34□□□□□ -1.23
COL6A2P12110 AL117351.1-201ENST00000438864 766 ntBASIC7.34□□□□□ -1.23
COL6A2P12110 LINC02474-202ENST00000441160 1148 ntTSL 5 BASIC7.34□□□□□ -1.23
COL6A2P12110 EFCAB14P1-201ENST00000442409 463 ntBASIC7.34□□□□□ -1.23
COL6A2P12110 MTND1P33-201ENST00000446251 917 ntBASIC7.34□□□□□ -1.23
COL6A2P12110 AL590004.3-201ENST00000450255 443 ntTSL 5 BASIC7.34□□□□□ -1.23
COL6A2P12110 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC7.34□□□□□ -1.23
COL6A2P12110 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC7.34□□□□□ -1.23
COL6A2P12110 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC7.34□□□□□ -1.23
COL6A2P12110 NAMPTP2-201ENST00000505629 1115 ntBASIC7.34□□□□□ -1.23
COL6A2P12110 AC112225.1-201ENST00000508230 297 ntBASIC7.34□□□□□ -1.23
COL6A2P12110 AC005351.1-201ENST00000511152 786 ntBASIC7.34□□□□□ -1.23
COL6A2P12110 AC119751.5-201ENST00000514077 770 ntBASIC7.34□□□□□ -1.23
COL6A2P12110 RNU6-491P-201ENST00000516099 110 ntBASIC7.34□□□□□ -1.23
COL6A2P12110 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC7.34□□□□□ -1.23
COL6A2P12110 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC7.34□□□□□ -1.23
COL6A2P12110 AC084816.1-211ENST00000540994 485 ntTSL 3 BASIC7.34□□□□□ -1.23
COL6A2P12110 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC7.34□□□□□ -1.23
COL6A2P12110 AC063923.2-201ENST00000562158 928 ntBASIC7.34□□□□□ -1.23
COL6A2P12110 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC7.34□□□□□ -1.23
COL6A2P12110 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
COL6A2P12110 AC092368.2-201ENST00000565911 600 ntBASIC7.34□□□□□ -1.23
COL6A2P12110 AC106730.2-201ENST00000566641 540 ntBASIC7.34□□□□□ -1.23
COL6A2P12110 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
COL6A2P12110 AC011472.3-201ENST00000586051 906 ntTSL 3 BASIC7.34□□□□□ -1.23
COL6A2P12110 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC7.34□□□□□ -1.23
COL6A2P12110 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC7.34□□□□□ -1.23
COL6A2P12110 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC7.34□□□□□ -1.23
COL6A2P12110 BNIP3P32-201ENST00000600015 554 ntBASIC7.34□□□□□ -1.23
COL6A2P12110 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC7.34□□□□□ -1.23
COL6A2P12110 AC010719.1-201ENST00000602992 747 ntBASIC7.34□□□□□ -1.23
COL6A2P12110 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC7.34□□□□□ -1.23
COL6A2P12110 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL6A2P12110 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
COL6A2P12110 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC7.34□□□□□ -1.23
COL6A2P12110 AC068205.4-201ENST00000637880 804 ntBASIC7.34□□□□□ -1.23
COL6A2P12110 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
COL6A2P12110 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC7.34□□□□□ -1.23
COL6A2P12110 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL6A2P12110 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC7.34□□□□□ -1.23
COL6A2P12110 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL6A2P12110 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.34□□□□□ -1.23
COL6A2P12110 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
COL6A2P12110 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
COL6A2P12110 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL6A2P12110 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL6A2P12110 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
COL6A2P12110 AL031651.1-201ENST00000615357 1438 ntBASIC7.34□□□□□ -1.23
COL6A2P12110 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL6A2P12110 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL6A2P12110 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.34□□□□□ -1.24
COL6A2P12110 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
COL6A2P12110 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.34□□□□□ -1.24
COL6A2P12110 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.34□□□□□ -1.24
COL6A2P12110 AC122713.2-201ENST00000624942 3335 ntBASIC7.34□□□□□ -1.24
COL6A2P12110 AC022819.1-201ENST00000563495 3910 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.33□□□□□ -1.24
COL6A2P12110 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL6A2P12110 EEF1A1P5-201ENST00000436459 1389 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 EEF1A1P26-201ENST00000458319 1363 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.33□□□□□ -1.24
COL6A2P12110 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.33□□□□□ -1.24
COL6A2P12110 CASC19-238ENST00000641523 1558 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 MAPK10-323ENST00000641493 3207 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC7.33□□□□□ -1.24
COL6A2P12110 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL6A2P12110 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
COL6A2P12110 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.33□□□□□ -1.24
COL6A2P12110 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms