Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AL136139.1-201ENST00000605568 222 ntBASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 AC241377.2-202ENST00000636462 997 ntBASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 CDY7P-201ENST00000429883 1604 ntBASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 MFSD8-256ENST00000641949 1640 ntBASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 JPX-212ENST00000639185 9658 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 SLC2A3P2-201ENST00000331747 1480 ntBASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 SFTPD-AS1-201ENST00000608229 5001 ntBASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DRB4X5D2U9 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 AC127070.3-201ENST00000503695 3263 ntBASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 RNU6-1017P-201ENST00000363613 106 ntBASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 FAM204BP-201ENST00000369171 701 ntBASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 RPL12P1-201ENST00000374520 498 ntBASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 AC006511.2-201ENST00000388966 660 ntBASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 RPSAP44-201ENST00000406712 884 ntBASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 TYMSP1-201ENST00000407851 869 ntBASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 RN7SKP236-201ENST00000410635 284 ntBASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 RN7SKP85-201ENST00000411349 318 ntBASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 SNX18P13-201ENST00000412442 529 ntBASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 RPL17P17-201ENST00000419491 557 ntBASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 VDAC2P3-201ENST00000430995 828 ntBASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 ST13P2-201ENST00000438916 1109 ntBASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 AC009237.4-201ENST00000441078 238 ntBASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 AC018475.1-201ENST00000478358 465 ntBASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 AC079594.1-201ENST00000489757 331 ntBASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 CHCHD2P7-201ENST00000508008 452 ntBASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 AL031846.1-201ENST00000560933 314 ntBASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 MIR5095-201ENST00000578844 88 ntBASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 MIR4470-201ENST00000583453 72 ntBASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 AC104184.1-201ENST00000607513 721 ntBASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 MIR6726-201ENST00000613751 61 ntBASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 AC010329.1-201ENST00000593903 8328 ntBASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 AL391261.1-201ENST00000555712 1479 ntBASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DRB4X5D2U9 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms