Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.08□□□□□ -1.44
SSX3Q99909 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SSX3Q99909 SNORA73B-201ENST00000363217 204 ntBASIC6.08□□□□□ -1.44
SSX3Q99909 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSX3Q99909 AC113608.1-201ENST00000398740 305 ntBASIC6.08□□□□□ -1.44
SSX3Q99909 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC6.08□□□□□ -1.44
SSX3Q99909 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SSX3Q99909 RN7SKP207-201ENST00000411204 303 ntBASIC6.08□□□□□ -1.44
SSX3Q99909 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.08□□□□□ -1.44
SSX3Q99909 AC244452.1-201ENST00000413798 141 ntBASIC6.08□□□□□ -1.44
SSX3Q99909 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC6.08□□□□□ -1.44
SSX3Q99909 KRTAP3-4P-201ENST00000430780 280 ntBASIC6.08□□□□□ -1.44
SSX3Q99909 RPL35P8-201ENST00000433284 337 ntBASIC6.08□□□□□ -1.44
SSX3Q99909 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.08□□□□□ -1.44
SSX3Q99909 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC6.08□□□□□ -1.44
SSX3Q99909 AC104389.2-201ENST00000450768 887 ntBASIC6.08□□□□□ -1.44
SSX3Q99909 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.08□□□□□ -1.44
SSX3Q99909 TAAR3P-201ENST00000466706 1078 ntBASIC6.08□□□□□ -1.44
SSX3Q99909 AC021074.2-201ENST00000468434 172 ntBASIC6.08□□□□□ -1.44
SSX3Q99909 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC6.08□□□□□ -1.44
SSX3Q99909 TAAR3P-202ENST00000481759 1025 ntBASIC6.08□□□□□ -1.44
SSX3Q99909 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC6.08□□□□□ -1.44
SSX3Q99909 RN7SL516P-201ENST00000496127 297 ntBASIC6.08□□□□□ -1.44
SSX3Q99909 AC017007.5-201ENST00000511590 874 ntTSL 2 BASIC6.08□□□□□ -1.44
SSX3Q99909 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.08□□□□□ -1.44
SSX3Q99909 AC022441.1-201ENST00000512599 794 ntTSL 3 BASIC6.08□□□□□ -1.44
SSX3Q99909 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC6.08□□□□□ -1.44
SSX3Q99909 SCARNA20.1-201ENST00000516009 138 ntBASIC6.08□□□□□ -1.44
SSX3Q99909 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SSX3Q99909 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSX3Q99909 AC018523.1-201ENST00000534211 512 ntBASIC6.08□□□□□ -1.44
SSX3Q99909 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC6.08□□□□□ -1.44
SSX3Q99909 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSX3Q99909 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC6.08□□□□□ -1.44
SSX3Q99909 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC6.08□□□□□ -1.44
SSX3Q99909 AC091304.5-201ENST00000568969 158 ntBASIC6.08□□□□□ -1.44
SSX3Q99909 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC6.08□□□□□ -1.44
SSX3Q99909 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC6.08□□□□□ -1.44
SSX3Q99909 OR5AH1P-201ENST00000595968 283 ntBASIC6.08□□□□□ -1.44
SSX3Q99909 AC015849.6-201ENST00000605454 474 ntBASIC6.08□□□□□ -1.44
SSX3Q99909 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSX3Q99909 BX005040.2-201ENST00000620504 370 ntBASIC6.08□□□□□ -1.44
SSX3Q99909 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC6.08□□□□□ -1.44
SSX3Q99909 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
SSX3Q99909 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
SSX3Q99909 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSX3Q99909 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSX3Q99909 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SSX3Q99909 AC011008.2-201ENST00000624866 3352 ntBASIC6.08□□□□□ -1.44
SSX3Q99909 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC6.08□□□□□ -1.44
SSX3Q99909 AKAP17BP-201ENST00000431706 2719 ntBASIC6.08□□□□□ -1.44
SSX3Q99909 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC6.08□□□□□ -1.44
SSX3Q99909 WASF5P-205ENST00000428639 1455 ntBASIC6.08□□□□□ -1.44
SSX3Q99909 SF3A3P1-201ENST00000446317 1477 ntBASIC6.08□□□□□ -1.44
SSX3Q99909 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.08□□□□□ -1.44
SSX3Q99909 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
SSX3Q99909 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SSX3Q99909 AC005034.3-201ENST00000604845 1747 ntBASIC6.08□□□□□ -1.44
SSX3Q99909 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSX3Q99909 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSX3Q99909 MAPK10-383ENST00000642032 3390 ntBASIC6.07□□□□□ -1.44
SSX3Q99909 AL355377.1-201ENST00000621125 1653 ntBASIC6.07□□□□□ -1.44
SSX3Q99909 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSX3Q99909 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSX3Q99909 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSX3Q99909 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.07□□□□□ -1.44
SSX3Q99909 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC6.07□□□□□ -1.44
SSX3Q99909 PABPC1P8-201ENST00000452851 2086 ntBASIC6.07□□□□□ -1.44
SSX3Q99909 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSX3Q99909 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSX3Q99909 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSX3Q99909 SNORA2C-201ENST00000408564 137 ntBASIC6.07□□□□□ -1.44
SSX3Q99909 RN7SKP236-201ENST00000410635 284 ntBASIC6.07□□□□□ -1.44
SSX3Q99909 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC6.07□□□□□ -1.44
SSX3Q99909 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC6.07□□□□□ -1.44
SSX3Q99909 CLIC4P3-201ENST00000422221 752 ntBASIC6.07□□□□□ -1.44
SSX3Q99909 RPL6P2-201ENST00000425480 783 ntBASIC6.07□□□□□ -1.44
SSX3Q99909 EEF1A1P27-201ENST00000429983 1135 ntBASIC6.07□□□□□ -1.44
SSX3Q99909 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC6.07□□□□□ -1.44
SSX3Q99909 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SSX3Q99909 AL590399.4-201ENST00000436561 601 ntBASIC6.07□□□□□ -1.44
SSX3Q99909 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC6.07□□□□□ -1.44
SSX3Q99909 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC6.07□□□□□ -1.44
SSX3Q99909 AL353803.3-201ENST00000444641 335 ntBASIC6.07□□□□□ -1.44
SSX3Q99909 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSX3Q99909 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SSX3Q99909 PPP1R11P1-201ENST00000486095 376 ntBASIC6.07□□□□□ -1.44
SSX3Q99909 TECRP2-201ENST00000503270 928 ntBASIC6.07□□□□□ -1.44
SSX3Q99909 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC6.07□□□□□ -1.44
SSX3Q99909 AC233724.10-201ENST00000510454 409 ntBASIC6.07□□□□□ -1.44
SSX3Q99909 DKK2-202ENST00000510463 908 ntTSL 3 BASIC6.07□□□□□ -1.44
SSX3Q99909 SETP21-201ENST00000514799 892 ntBASIC6.07□□□□□ -1.44
SSX3Q99909 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.07□□□□□ -1.44
SSX3Q99909 HNRNPCP8-201ENST00000528764 888 ntBASIC6.07□□□□□ -1.44
SSX3Q99909 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
SSX3Q99909 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSX3Q99909 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.07□□□□□ -1.44
SSX3Q99909 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SSX3Q99909 TMX3-204ENST00000562706 937 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSX3Q99909 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms