Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.91□□□□□ -1.46
AP3S2P59780 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC5.91□□□□□ -1.46
AP3S2P59780 AC084337.1-201ENST00000524809 686 ntBASIC5.91□□□□□ -1.46
AP3S2P59780 GTF2IP11-201ENST00000526931 420 ntBASIC5.91□□□□□ -1.46
AP3S2P59780 RAB2A-208ENST00000529579 680 ntTSL 2 BASIC5.91□□□□□ -1.46
AP3S2P59780 TMEM132D-AS1-204ENST00000537367 531 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
AP3S2P59780 AC024270.1-201ENST00000559181 404 ntBASIC5.91□□□□□ -1.46
AP3S2P59780 RPLP1-205ENST00000560274 256 ntTSL 3 BASIC5.91□□□□□ -1.46
AP3S2P59780 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC5.91□□□□□ -1.46
AP3S2P59780 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC5.91□□□□□ -1.46
AP3S2P59780 AC022149.1-201ENST00000596032 609 ntBASIC5.91□□□□□ -1.46
AP3S2P59780 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC5.91□□□□□ -1.46
AP3S2P59780 YTHDF2P1-201ENST00000604759 1271 ntBASIC5.91□□□□□ -1.46
AP3S2P59780 AL627309.1-205ENST00000610542 723 ntTSL 5 BASIC5.91□□□□□ -1.46
AP3S2P59780 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC5.91□□□□□ -1.46
AP3S2P59780 CNTNAP3P1-201ENST00000616657 906 ntBASIC5.91□□□□□ -1.46
AP3S2P59780 AC239600.2-201ENST00000619615 1165 ntBASIC5.91□□□□□ -1.46
AP3S2P59780 Z99916.3-201ENST00000623422 1080 ntBASIC5.91□□□□□ -1.46
AP3S2P59780 AC005691.1-201ENST00000624723 401 ntBASIC5.91□□□□□ -1.46
AP3S2P59780 AC006213.6-201ENST00000623722 4179 ntBASIC5.91□□□□□ -1.46
AP3S2P59780 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.91□□□□□ -1.46
AP3S2P59780 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC5.91□□□□□ -1.46
AP3S2P59780 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
AP3S2P59780 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
AP3S2P59780 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
AP3S2P59780 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
AP3S2P59780 KYNUP1-201ENST00000466683 1406 ntBASIC5.91□□□□□ -1.46
AP3S2P59780 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
AP3S2P59780 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
AP3S2P59780 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.9□□□□□ -1.46
AP3S2P59780 AC108463.3-201ENST00000603748 1482 ntBASIC5.9□□□□□ -1.46
AP3S2P59780 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.9□□□□□ -1.46
AP3S2P59780 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
AP3S2P59780 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC5.9□□□□□ -1.46
AP3S2P59780 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
AP3S2P59780 AC005225.5-201ENST00000623547 2225 ntBASIC5.9□□□□□ -1.46
AP3S2P59780 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.9□□□□□ -1.46
AP3S2P59780 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.9□□□□□ -1.46
AP3S2P59780 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
AP3S2P59780 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
AP3S2P59780 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
AP3S2P59780 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
AP3S2P59780 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.9□□□□□ -1.46
AP3S2P59780 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.9□□□□□ -1.46
AP3S2P59780 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC5.9□□□□□ -1.46
AP3S2P59780 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
AP3S2P59780 IL37-201ENST00000263326 772 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
AP3S2P59780 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
AP3S2P59780 SNORD8-201ENST00000363915 110 ntBASIC5.9□□□□□ -1.46
AP3S2P59780 TRGV1-201ENST00000390348 465 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
AP3S2P59780 CES5AP1-201ENST00000400418 859 ntBASIC5.9□□□□□ -1.46
AP3S2P59780 AC104455.1-201ENST00000417340 736 ntBASIC5.9□□□□□ -1.46
AP3S2P59780 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
AP3S2P59780 LINC01811-202ENST00000424786 787 ntTSL 5 BASIC5.9□□□□□ -1.46
AP3S2P59780 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC5.9□□□□□ -1.46
AP3S2P59780 OR51R1P-201ENST00000435309 952 ntBASIC5.9□□□□□ -1.46
AP3S2P59780 AL731567.1-201ENST00000435635 462 ntTSL 2 BASIC5.9□□□□□ -1.46
AP3S2P59780 AL355149.1-201ENST00000438396 882 ntBASIC5.9□□□□□ -1.46
AP3S2P59780 DNAJC19P5-201ENST00000443295 316 ntBASIC5.9□□□□□ -1.46
AP3S2P59780 CRYGGP-201ENST00000443337 145 ntBASIC5.9□□□□□ -1.46
AP3S2P59780 TVP23CP1-201ENST00000450317 639 ntBASIC5.9□□□□□ -1.46
AP3S2P59780 ANAPC10-202ENST00000451299 928 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
AP3S2P59780 SNX18P8-201ENST00000455120 874 ntBASIC5.9□□□□□ -1.46
AP3S2P59780 RPSAP7-201ENST00000456871 885 ntBASIC5.9□□□□□ -1.46
AP3S2P59780 TAAR3P-201ENST00000466706 1078 ntBASIC5.9□□□□□ -1.46
AP3S2P59780 PAQR9-AS1-201ENST00000478823 610 ntTSL 3 BASIC5.9□□□□□ -1.46
AP3S2P59780 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
AP3S2P59780 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC5.9□□□□□ -1.46
AP3S2P59780 IGLV3-6-201ENST00000523937 250 ntBASIC5.9□□□□□ -1.46
AP3S2P59780 AC068790.1-201ENST00000536166 355 ntBASIC5.9□□□□□ -1.46
AP3S2P59780 AC084816.1-211ENST00000540994 485 ntTSL 3 BASIC5.9□□□□□ -1.46
AP3S2P59780 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC5.9□□□□□ -1.46
AP3S2P59780 EEF1B2P1-201ENST00000567221 672 ntBASIC5.9□□□□□ -1.46
AP3S2P59780 OOSP1P2-201ENST00000579644 351 ntBASIC5.9□□□□□ -1.46
AP3S2P59780 GOSR1-212ENST00000581721 756 ntTSL 5 BASIC5.9□□□□□ -1.46
AP3S2P59780 RN7SL667P-201ENST00000582817 298 ntBASIC5.9□□□□□ -1.46
AP3S2P59780 AC003002.3-201ENST00000597410 521 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
AP3S2P59780 AL078623.1-201ENST00000602702 907 ntBASIC5.9□□□□□ -1.46
AP3S2P59780 AL583832.1-201ENST00000603227 784 ntBASIC5.9□□□□□ -1.46
AP3S2P59780 TTR-205ENST00000613781 556 ntTSL 5 BASIC5.9□□□□□ -1.46
AP3S2P59780 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC5.9□□□□□ -1.46
AP3S2P59780 U1.41-201ENST00000617626 165 ntBASIC5.9□□□□□ -1.46
AP3S2P59780 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC5.9□□□□□ -1.46
AP3S2P59780 AC012254.5-201ENST00000623573 478 ntBASIC5.9□□□□□ -1.46
AP3S2P59780 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC5.9□□□□□ -1.46
AP3S2P59780 AC007012.2-201ENST00000623206 1676 ntBASIC5.9□□□□□ -1.47
AP3S2P59780 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
AP3S2P59780 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
AP3S2P59780 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC5.9□□□□□ -1.47
AP3S2P59780 CHD2-212ENST00000627622 1740 ntTSL 2 BASIC5.9□□□□□ -1.47
AP3S2P59780 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.9□□□□□ -1.47
AP3S2P59780 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
AP3S2P59780 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
AP3S2P59780 EEF1A1P22-201ENST00000559385 1380 ntBASIC5.9□□□□□ -1.47
AP3S2P59780 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
AP3S2P59780 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
AP3S2P59780 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC5.9□□□□□ -1.47
AP3S2P59780 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
AP3S2P59780 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
AP3S2P59780 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms