Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
CACNA2D1P54289 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.5□□□□□ -1.21
CACNA2D1P54289 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.5□□□□□ -1.21
CACNA2D1P54289 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CACNA2D1P54289 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CACNA2D1P54289 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
CACNA2D1P54289 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CACNA2D1P54289 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.5□□□□□ -1.21
CACNA2D1P54289 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.5□□□□□ -1.21
CACNA2D1P54289 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CACNA2D1P54289 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CACNA2D1P54289 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CACNA2D1P54289 KARSP2-201ENST00000415696 1639 ntBASIC7.49□□□□□ -1.21
CACNA2D1P54289 AC079178.2-201ENST00000439323 1624 ntBASIC7.49□□□□□ -1.21
CACNA2D1P54289 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7.49□□□□□ -1.21
CACNA2D1P54289 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.49□□□□□ -1.21
CACNA2D1P54289 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
CACNA2D1P54289 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CACNA2D1P54289 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
CACNA2D1P54289 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CACNA2D1P54289 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
CACNA2D1P54289 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CACNA2D1P54289 RN7SKP55-201ENST00000364888 307 ntBASIC7.49□□□□□ -1.21
CACNA2D1P54289 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CACNA2D1P54289 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
CACNA2D1P54289 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
CACNA2D1P54289 EEF1GP6-201ENST00000402309 905 ntBASIC7.49□□□□□ -1.21
CACNA2D1P54289 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC7.49□□□□□ -1.21
CACNA2D1P54289 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC7.49□□□□□ -1.21
CACNA2D1P54289 YWHAZP5-201ENST00000419975 730 ntBASIC7.49□□□□□ -1.21
CACNA2D1P54289 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CACNA2D1P54289 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
CACNA2D1P54289 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CACNA2D1P54289 PHB2P1-201ENST00000434943 890 ntBASIC7.49□□□□□ -1.21
CACNA2D1P54289 AL356133.1-201ENST00000444762 372 ntBASIC7.49□□□□□ -1.21
CACNA2D1P54289 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CACNA2D1P54289 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.49□□□□□ -1.21
CACNA2D1P54289 NUCKS1P1-201ENST00000452067 703 ntBASIC7.49□□□□□ -1.21
CACNA2D1P54289 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
CACNA2D1P54289 RN7SL325P-201ENST00000460434 283 ntBASIC7.49□□□□□ -1.21
CACNA2D1P54289 AL591122.1-201ENST00000487348 492 ntBASIC7.49□□□□□ -1.21
CACNA2D1P54289 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CACNA2D1P54289 PFN2-213ENST00000494827 793 ntTSL 4 BASIC7.49□□□□□ -1.21
CACNA2D1P54289 AC008868.1-201ENST00000509786 737 ntBASIC7.49□□□□□ -1.21
CACNA2D1P54289 AC027801.3-201ENST00000515049 698 ntBASIC7.49□□□□□ -1.21
CACNA2D1P54289 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.49□□□□□ -1.21
CACNA2D1P54289 AC100832.2-201ENST00000582080 776 ntBASIC7.49□□□□□ -1.21
CACNA2D1P54289 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.49□□□□□ -1.21
CACNA2D1P54289 MIR4428-201ENST00000584884 73 ntBASIC7.49□□□□□ -1.21
CACNA2D1P54289 OR7E19P-202ENST00000589942 844 ntBASIC7.49□□□□□ -1.21
CACNA2D1P54289 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC7.49□□□□□ -1.21
CACNA2D1P54289 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC7.49□□□□□ -1.21
CACNA2D1P54289 AC008626.2-201ENST00000624425 248 ntBASIC7.49□□□□□ -1.21
CACNA2D1P54289 TMEM14EP-202ENST00000639378 1296 ntBASIC7.49□□□□□ -1.21
CACNA2D1P54289 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CACNA2D1P54289 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CACNA2D1P54289 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC7.49□□□□□ -1.21
CACNA2D1P54289 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC7.49□□□□□ -1.21
CACNA2D1P54289 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CACNA2D1P54289 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CACNA2D1P54289 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CACNA2D1P54289 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CACNA2D1P54289 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.49□□□□□ -1.21
CACNA2D1P54289 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CACNA2D1P54289 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CACNA2D1P54289 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC7.49□□□□□ -1.21
CACNA2D1P54289 AL117378.2-201ENST00000622916 1337 ntBASIC7.49□□□□□ -1.21
CACNA2D1P54289 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
CACNA2D1P54289 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
CACNA2D1P54289 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CACNA2D1P54289 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.49□□□□□ -1.21
CACNA2D1P54289 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CACNA2D1P54289 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CACNA2D1P54289 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.49□□□□□ -1.21
CACNA2D1P54289 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CACNA2D1P54289 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC7.49□□□□□ -1.21
CACNA2D1P54289 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CACNA2D1P54289 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
CACNA2D1P54289 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CACNA2D1P54289 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
CACNA2D1P54289 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.48□□□□□ -1.21
CACNA2D1P54289 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.48□□□□□ -1.21
CACNA2D1P54289 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CACNA2D1P54289 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
CACNA2D1P54289 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
CACNA2D1P54289 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CACNA2D1P54289 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CACNA2D1P54289 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC7.48□□□□□ -1.21
CACNA2D1P54289 RNU12-2P-201ENST00000364789 156 ntBASIC7.48□□□□□ -1.21
CACNA2D1P54289 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CACNA2D1P54289 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC7.48□□□□□ -1.21
CACNA2D1P54289 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CACNA2D1P54289 AC006511.2-201ENST00000388966 660 ntBASIC7.48□□□□□ -1.21
CACNA2D1P54289 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CACNA2D1P54289 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CACNA2D1P54289 RPL6P21-201ENST00000418672 846 ntBASIC7.48□□□□□ -1.21
CACNA2D1P54289 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CACNA2D1P54289 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC7.48□□□□□ -1.21
CACNA2D1P54289 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC7.48□□□□□ -1.21
CACNA2D1P54289 SDR42E1P3-201ENST00000438345 502 ntBASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms