Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC6.46□□□□□ -1.37
NPIPA3F8WFD2 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
NPIPA3F8WFD2 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
NPIPA3F8WFD2 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.46□□□□□ -1.37
NPIPA3F8WFD2 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC6.46□□□□□ -1.37
NPIPA3F8WFD2 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC6.46□□□□□ -1.37
NPIPA3F8WFD2 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.37
NPIPA3F8WFD2 FLJ42393-201ENST00000623801 2270 ntBASIC6.46□□□□□ -1.37
NPIPA3F8WFD2 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 RN7SKP55-201ENST00000364888 307 ntBASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 RNA5SP280-201ENST00000411230 115 ntBASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 RN7SKP85-201ENST00000411349 318 ntBASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 AC091492.1-201ENST00000419844 272 ntBASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 AL354794.2-201ENST00000424795 1248 ntBASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 AC114402.2-201ENST00000432760 643 ntBASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 BMS1P11-201ENST00000442351 885 ntBASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 CT45A11P-201ENST00000448043 1134 ntBASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 BMS1P9-201ENST00000457640 885 ntBASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 AC117395.2-201ENST00000463122 1128 ntBASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 RPL23AP80-201ENST00000495605 424 ntBASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 HSPD1P1-201ENST00000503199 1726 ntBASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 SSX8-201ENST00000506270 579 ntBASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 AC120036.3-201ENST00000517826 292 ntBASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 AC068408.1-201ENST00000577406 1144 ntBASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 MIR5682-201ENST00000584864 76 ntBASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 AL355333.1-201ENST00000605632 279 ntBASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 AL121583.1-201ENST00000612444 682 ntBASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 AC005753.1-201ENST00000623837 618 ntBASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 SALL4P7-201ENST00000555779 3120 ntBASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.46□□□□□ -1.38
NPIPA3F8WFD2 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 OR4C1P-202ENST00000641065 1569 ntBASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 AC138915.4-201ENST00000565549 4147 ntBASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 OR2A3P-202ENST00000641249 1776 ntBASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 VDAC1P10-201ENST00000416715 891 ntBASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 BTG3P1-201ENST00000435859 716 ntBASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 MED28P7-201ENST00000456611 530 ntBASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 RPSAP7-201ENST00000456871 885 ntBASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 RN7SL612P-201ENST00000497704 295 ntBASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 AC055733.3-201ENST00000505214 523 ntBASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 AC111000.5-201ENST00000506559 1178 ntBASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 OR7E158P-201ENST00000524483 910 ntBASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 AC131935.1-201ENST00000524621 333 ntBASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 GLYATL1P4-201ENST00000529326 906 ntBASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 AP002004.1-206ENST00000532441 876 ntBASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 AL135978.1-201ENST00000553618 1266 ntBASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 RN7SL32P-201ENST00000580514 281 ntBASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 AC005479.3-201ENST00000602790 431 ntBASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 AL139317.4-201ENST00000605879 760 ntBASIC6.45□□□□□ -1.38
NPIPA3F8WFD2 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms