Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC8.36□□□□□ -1.07
SNED1Q8TER0 ZHX3-214ENST00000559234 6296 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SNED1Q8TER0 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
SNED1Q8TER0 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
SNED1Q8TER0 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC8.36□□□□□ -1.07
SNED1Q8TER0 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SNED1Q8TER0 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SNED1Q8TER0 Z99129.4-201ENST00000624649 2435 ntBASIC8.36□□□□□ -1.07
SNED1Q8TER0 AC009108.3-201ENST00000602739 3515 ntBASIC8.36□□□□□ -1.07
SNED1Q8TER0 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
SNED1Q8TER0 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SNED1Q8TER0 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
SNED1Q8TER0 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
SNED1Q8TER0 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SNED1Q8TER0 U3.52-201ENST00000384034 216 ntBASIC8.36□□□□□ -1.07
SNED1Q8TER0 RPA3-204ENST00000406109 434 ntTSL 3 BASIC8.36□□□□□ -1.07
SNED1Q8TER0 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC8.36□□□□□ -1.07
SNED1Q8TER0 OR2AF1P-201ENST00000454899 889 ntBASIC8.36□□□□□ -1.07
SNED1Q8TER0 RN7SL39P-201ENST00000462264 297 ntBASIC8.36□□□□□ -1.07
SNED1Q8TER0 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
SNED1Q8TER0 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SNED1Q8TER0 AC004232.2-201ENST00000574245 821 ntBASIC8.36□□□□□ -1.07
SNED1Q8TER0 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
SNED1Q8TER0 IGKV2OR2-1-201ENST00000605129 304 ntBASIC8.36□□□□□ -1.07
SNED1Q8TER0 SNORD96A-201ENST00000606577 79 ntBASIC8.36□□□□□ -1.07
SNED1Q8TER0 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC8.36□□□□□ -1.07
SNED1Q8TER0 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
SNED1Q8TER0 AC025262.3-201ENST00000623666 360 ntBASIC8.36□□□□□ -1.07
SNED1Q8TER0 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC8.36□□□□□ -1.07
SNED1Q8TER0 TEX41-255ENST00000626404 610 ntTSL 5 BASIC8.36□□□□□ -1.07
SNED1Q8TER0 AC073488.2-201ENST00000631903 751 ntBASIC8.36□□□□□ -1.07
SNED1Q8TER0 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SNED1Q8TER0 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SNED1Q8TER0 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC8.36□□□□□ -1.07
SNED1Q8TER0 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
SNED1Q8TER0 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
SNED1Q8TER0 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SNED1Q8TER0 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SNED1Q8TER0 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SNED1Q8TER0 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
SNED1Q8TER0 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SNED1Q8TER0 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
SNED1Q8TER0 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
SNED1Q8TER0 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
SNED1Q8TER0 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SNED1Q8TER0 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
SNED1Q8TER0 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC8.35□□□□□ -1.07
SNED1Q8TER0 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SNED1Q8TER0 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
SNED1Q8TER0 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SNED1Q8TER0 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC8.35□□□□□ -1.07
SNED1Q8TER0 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC8.35□□□□□ -1.07
SNED1Q8TER0 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SNED1Q8TER0 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC8.35□□□□□ -1.07
SNED1Q8TER0 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
SNED1Q8TER0 AC087501.5-201ENST00000607496 2374 ntBASIC8.35□□□□□ -1.07
SNED1Q8TER0 RNU6-1017P-201ENST00000363613 106 ntBASIC8.35□□□□□ -1.07
SNED1Q8TER0 RNU1-84P-201ENST00000365447 164 ntBASIC8.35□□□□□ -1.07
SNED1Q8TER0 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC8.35□□□□□ -1.07
SNED1Q8TER0 MIR188-201ENST00000385034 86 ntBASIC8.35□□□□□ -1.07
SNED1Q8TER0 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC8.35□□□□□ -1.07
SNED1Q8TER0 GPN3P1-201ENST00000423883 535 ntBASIC8.35□□□□□ -1.07
SNED1Q8TER0 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SNED1Q8TER0 RPS27P20-201ENST00000492051 246 ntBASIC8.35□□□□□ -1.07
SNED1Q8TER0 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC8.35□□□□□ -1.07
SNED1Q8TER0 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC8.35□□□□□ -1.07
SNED1Q8TER0 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC8.35□□□□□ -1.07
SNED1Q8TER0 RN7SL199P-201ENST00000578752 281 ntBASIC8.35□□□□□ -1.07
SNED1Q8TER0 RN7SL656P-201ENST00000579044 281 ntBASIC8.35□□□□□ -1.07
SNED1Q8TER0 RN7SL270P-201ENST00000579643 281 ntBASIC8.35□□□□□ -1.07
SNED1Q8TER0 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC8.35□□□□□ -1.07
SNED1Q8TER0 AL035422.2-201ENST00000603059 565 ntBASIC8.35□□□□□ -1.07
SNED1Q8TER0 AC004908.1-201ENST00000606572 541 ntBASIC8.35□□□□□ -1.07
SNED1Q8TER0 AL135999.3-201ENST00000610501 812 ntBASIC8.35□□□□□ -1.07
SNED1Q8TER0 AC022400.9-201ENST00000623633 273 ntBASIC8.35□□□□□ -1.07
SNED1Q8TER0 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC8.35□□□□□ -1.07
SNED1Q8TER0 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
SNED1Q8TER0 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SNED1Q8TER0 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC8.35□□□□□ -1.07
SNED1Q8TER0 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SNED1Q8TER0 AC104964.2-201ENST00000562242 4641 ntBASIC8.34□□□□□ -1.07
SNED1Q8TER0 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SNED1Q8TER0 AC015871.4-201ENST00000624650 2260 ntBASIC8.34□□□□□ -1.07
SNED1Q8TER0 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
SNED1Q8TER0 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
SNED1Q8TER0 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
SNED1Q8TER0 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SNED1Q8TER0 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
SNED1Q8TER0 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SNED1Q8TER0 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
SNED1Q8TER0 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC8.34□□□□□ -1.07
SNED1Q8TER0 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
SNED1Q8TER0 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SNED1Q8TER0 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SNED1Q8TER0 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC8.34□□□□□ -1.07
SNED1Q8TER0 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC8.34□□□□□ -1.07
SNED1Q8TER0 AC105342.1-201ENST00000378334 6848 ntBASIC8.34□□□□□ -1.07
SNED1Q8TER0 RNA5SP433-201ENST00000364491 114 ntBASIC8.34□□□□□ -1.07
SNED1Q8TER0 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
SNED1Q8TER0 RNA5SP474-201ENST00000391234 90 ntBASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms