Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
SSR1P43307 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
SSR1P43307 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
SSR1P43307 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SSR1P43307 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SSR1P43307 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SSR1P43307 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
SSR1P43307 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
SSR1P43307 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SSR1P43307 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
SSR1P43307 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.57□□□□□ -1.2
SSR1P43307 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
SSR1P43307 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
SSR1P43307 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SSR1P43307 PPIAP30-201ENST00000415473 519 ntBASIC7.57□□□□□ -1.2
SSR1P43307 AL390840.1-201ENST00000420303 988 ntBASIC7.57□□□□□ -1.2
SSR1P43307 GAPDHP55-201ENST00000423136 803 ntBASIC7.57□□□□□ -1.2
SSR1P43307 AL121916.1-201ENST00000429405 308 ntBASIC7.57□□□□□ -1.2
SSR1P43307 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC7.57□□□□□ -1.2
SSR1P43307 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC7.57□□□□□ -1.2
SSR1P43307 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SSR1P43307 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SSR1P43307 AC016489.1-201ENST00000461109 375 ntBASIC7.57□□□□□ -1.2
SSR1P43307 RN7SL688P-201ENST00000471754 275 ntBASIC7.57□□□□□ -1.2
SSR1P43307 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC7.57□□□□□ -1.2
SSR1P43307 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC7.57□□□□□ -1.2
SSR1P43307 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC7.57□□□□□ -1.2
SSR1P43307 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC7.57□□□□□ -1.2
SSR1P43307 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC7.57□□□□□ -1.2
SSR1P43307 AC068631.3-201ENST00000538831 225 ntBASIC7.57□□□□□ -1.2
SSR1P43307 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.57□□□□□ -1.2
SSR1P43307 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC7.57□□□□□ -1.2
SSR1P43307 AC097376.1-201ENST00000602907 997 ntBASIC7.57□□□□□ -1.2
SSR1P43307 RPS28P1-201ENST00000604589 187 ntBASIC7.57□□□□□ -1.2
SSR1P43307 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC7.57□□□□□ -1.2
SSR1P43307 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC7.57□□□□□ -1.2
SSR1P43307 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.57□□□□□ -1.2
SSR1P43307 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SSR1P43307 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
SSR1P43307 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC7.57□□□□□ -1.2
SSR1P43307 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SSR1P43307 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SSR1P43307 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SSR1P43307 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SSR1P43307 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
SSR1P43307 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
SSR1P43307 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SSR1P43307 AL035563.1-201ENST00000609087 1539 ntBASIC7.57□□□□□ -1.2
SSR1P43307 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC7.57□□□□□ -1.2
SSR1P43307 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SSR1P43307 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SSR1P43307 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
SSR1P43307 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC7.56□□□□□ -1.2
SSR1P43307 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
SSR1P43307 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SSR1P43307 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
SSR1P43307 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
SSR1P43307 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
SSR1P43307 AL138847.1-201ENST00000258651 546 ntBASIC7.56□□□□□ -1.2
SSR1P43307 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SSR1P43307 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SSR1P43307 MIR128-2-201ENST00000384893 84 ntBASIC7.56□□□□□ -1.2
SSR1P43307 NPM1P38-201ENST00000403835 865 ntBASIC7.56□□□□□ -1.2
SSR1P43307 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC7.56□□□□□ -1.2
SSR1P43307 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC7.56□□□□□ -1.2
SSR1P43307 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC7.56□□□□□ -1.2
SSR1P43307 HIST1H2APS6-201ENST00000448609 364 ntBASIC7.56□□□□□ -1.2
SSR1P43307 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SSR1P43307 RN7SL282P-201ENST00000479676 297 ntBASIC7.56□□□□□ -1.2
SSR1P43307 AC097263.1-201ENST00000496795 606 ntBASIC7.56□□□□□ -1.2
SSR1P43307 OR7E163P-201ENST00000505943 894 ntBASIC7.56□□□□□ -1.2
SSR1P43307 PGAM4P2-201ENST00000512491 721 ntBASIC7.56□□□□□ -1.2
SSR1P43307 AC087257.2-201ENST00000538759 928 ntBASIC7.56□□□□□ -1.2
SSR1P43307 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.56□□□□□ -1.2
SSR1P43307 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC7.56□□□□□ -1.2
SSR1P43307 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
SSR1P43307 MIR4262-201ENST00000578394 54 ntBASIC7.56□□□□□ -1.2
SSR1P43307 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC7.56□□□□□ -1.2
SSR1P43307 RN7SL25P-201ENST00000583862 260 ntBASIC7.56□□□□□ -1.2
SSR1P43307 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC7.56□□□□□ -1.2
SSR1P43307 FXYD6P1-201ENST00000604857 285 ntBASIC7.56□□□□□ -1.2
SSR1P43307 AL513218.1-201ENST00000606527 391 ntBASIC7.56□□□□□ -1.2
SSR1P43307 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC7.56□□□□□ -1.2
SSR1P43307 FAM27E3-202ENST00000614611 340 ntBASIC7.56□□□□□ -1.2
SSR1P43307 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
SSR1P43307 AC119674.1-217ENST00000641942 1086 ntBASIC7.56□□□□□ -1.2
SSR1P43307 AC119674.1-209ENST00000642031 997 ntBASIC7.56□□□□□ -1.2
SSR1P43307 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.56□□□□□ -1.2
SSR1P43307 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
SSR1P43307 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SSR1P43307 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
SSR1P43307 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SSR1P43307 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.56□□□□□ -1.2
SSR1P43307 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SSR1P43307 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SSR1P43307 AL078595.2-201ENST00000605309 1780 ntBASIC7.56□□□□□ -1.2
SSR1P43307 AC127070.3-201ENST00000503695 3263 ntBASIC7.56□□□□□ -1.2
SSR1P43307 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
SSR1P43307 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC7.56□□□□□ -1.2
SSR1P43307 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms