Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC080014.1-201ENST00000496877 1201 ntBASIC7.2□□□□□ -1.26
ATG4DQ86TL0 AC113420.1-201ENST00000507903 571 ntBASIC7.2□□□□□ -1.26
ATG4DQ86TL0 AC034232.2-201ENST00000511579 917 ntTSL 2 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 AC010442.1-201ENST00000515583 816 ntBASIC7.2□□□□□ -1.26
ATG4DQ86TL0 RNU6-1178P-201ENST00000516674 107 ntBASIC7.2□□□□□ -1.26
ATG4DQ86TL0 AC091096.1-201ENST00000521955 614 ntTSL 3 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 SDHCP4-201ENST00000532834 510 ntBASIC7.2□□□□□ -1.26
ATG4DQ86TL0 RERGL-202ENST00000536890 367 ntTSL 3 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 LRTOMT-212ENST00000536917 579 ntTSL 3 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 AC243972.1-201ENST00000542992 570 ntTSL 4 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 AP005205.1-201ENST00000563503 508 ntBASIC7.2□□□□□ -1.26
ATG4DQ86TL0 MIR3714-201ENST00000579507 65 ntBASIC7.2□□□□□ -1.26
ATG4DQ86TL0 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 SNRPCP20-201ENST00000588011 210 ntBASIC7.2□□□□□ -1.26
ATG4DQ86TL0 AC008770.1-206ENST00000589551 523 ntTSL 3 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 AC008392.1-201ENST00000600941 437 ntTSL 2 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 AL049829.3-202ENST00000604278 711 ntBASIC7.2□□□□□ -1.26
ATG4DQ86TL0 AL445222.1-201ENST00000607259 628 ntBASIC7.2□□□□□ -1.26
ATG4DQ86TL0 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 AL669830.1-201ENST00000621457 656 ntBASIC7.2□□□□□ -1.26
ATG4DQ86TL0 AC090099.1-204ENST00000623626 849 ntBASIC7.2□□□□□ -1.26
ATG4DQ86TL0 AL359740.1-201ENST00000624340 592 ntBASIC7.2□□□□□ -1.26
ATG4DQ86TL0 MIR3120-201ENST00000636555 81 ntBASIC7.2□□□□□ -1.26
ATG4DQ86TL0 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 AC011447.6-201ENST00000623510 2598 ntBASIC7.2□□□□□ -1.26
ATG4DQ86TL0 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 ZNF430-203ENST00000595401 3021 ntTSL 2 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 C10orf25-201ENST00000625168 3078 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 GLRA4-201ENST00000372617 1795 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
ATG4DQ86TL0 GSG1-203ENST00000396302 1628 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
ATG4DQ86TL0 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
ATG4DQ86TL0 HSD11B1-202ENST00000367027 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ATG4DQ86TL0 AL390237.1-201ENST00000404226 1415 ntBASIC7.19□□□□□ -1.26
ATG4DQ86TL0 AL353622.1-201ENST00000604716 1945 ntBASIC7.19□□□□□ -1.26
ATG4DQ86TL0 DET1-202ENST00000444300 2154 ntTSL 5 BASIC7.19□□□□□ -1.26
ATG4DQ86TL0 HSP90AB2P-201ENST00000507090 2176 ntBASIC7.19□□□□□ -1.26
ATG4DQ86TL0 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
ATG4DQ86TL0 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ATG4DQ86TL0 LINC01103-201ENST00000430551 1457 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
ATG4DQ86TL0 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ATG4DQ86TL0 AC016930.1-201ENST00000468766 2205 ntBASIC7.19□□□□□ -1.26
ATG4DQ86TL0 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
ATG4DQ86TL0 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC7.19□□□□□ -1.26
ATG4DQ86TL0 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC7.19□□□□□ -1.26
ATG4DQ86TL0 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC7.19□□□□□ -1.26
ATG4DQ86TL0 LPP-208ENST00000448637 5835 ntTSL 5 BASIC7.19□□□□□ -1.26
ATG4DQ86TL0 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC7.19□□□□□ -1.26
ATG4DQ86TL0 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC7.19□□□□□ -1.26
ATG4DQ86TL0 AL450124.1-201ENST00000376401 353 ntBASIC7.19□□□□□ -1.26
ATG4DQ86TL0 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
ATG4DQ86TL0 OR5H15-201ENST00000383696 930 ntBASIC7.19□□□□□ -1.26
ATG4DQ86TL0 RNU1-11P-201ENST00000383975 164 ntBASIC7.19□□□□□ -1.26
ATG4DQ86TL0 IGLV3-32-201ENST00000390303 383 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
ATG4DQ86TL0 RPS3AP24-201ENST00000407896 734 ntBASIC7.19□□□□□ -1.26
ATG4DQ86TL0 RNU6ATAC25P-201ENST00000408798 117 ntBASIC7.19□□□□□ -1.26
ATG4DQ86TL0 SLC25A5P2-201ENST00000413713 897 ntBASIC7.19□□□□□ -1.26
ATG4DQ86TL0 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC7.19□□□□□ -1.26
ATG4DQ86TL0 RANP5-201ENST00000427731 655 ntBASIC7.19□□□□□ -1.26
ATG4DQ86TL0 AL121601.2-201ENST00000438019 707 ntBASIC7.19□□□□□ -1.26
ATG4DQ86TL0 XKRY2-201ENST00000442362 1093 ntBASIC7.19□□□□□ -1.26
ATG4DQ86TL0 AC005297.1-201ENST00000444765 862 ntBASIC7.19□□□□□ -1.26
ATG4DQ86TL0 LINC01320-202ENST00000453774 1205 ntTSL 3 BASIC7.19□□□□□ -1.26
ATG4DQ86TL0 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
ATG4DQ86TL0 PPIAP28-201ENST00000458378 485 ntBASIC7.19□□□□□ -1.26
ATG4DQ86TL0 NPM1P29-201ENST00000483112 803 ntBASIC7.19□□□□□ -1.26
ATG4DQ86TL0 AC116353.1-201ENST00000489727 316 ntBASIC7.19□□□□□ -1.26
ATG4DQ86TL0 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC7.19□□□□□ -1.26
ATG4DQ86TL0 AC107385.1-201ENST00000507985 778 ntBASIC7.19□□□□□ -1.26
ATG4DQ86TL0 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC7.19□□□□□ -1.26
ATG4DQ86TL0 XKRY-201ENST00000510392 1100 ntBASIC7.19□□□□□ -1.26
ATG4DQ86TL0 AC108157.1-201ENST00000510511 539 ntBASIC7.19□□□□□ -1.26
ATG4DQ86TL0 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC7.19□□□□□ -1.26
ATG4DQ86TL0 AC022778.1-201ENST00000518302 545 ntTSL 3 BASIC7.19□□□□□ -1.26
ATG4DQ86TL0 AC136424.1-201ENST00000518425 542 ntTSL 4 BASIC7.19□□□□□ -1.26
ATG4DQ86TL0 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC7.19□□□□□ -1.26
ATG4DQ86TL0 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC7.19□□□□□ -1.26
ATG4DQ86TL0 CCNG2P1-201ENST00000549521 1000 ntBASIC7.19□□□□□ -1.26
ATG4DQ86TL0 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms