Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 RAB30-AS1-203ENST00000527627 504 ntTSL 310.19□□□□□ -0.789e-7■□□□□ 10.5
PRPF8Q6P2Q9 RAB30-AS1-201ENST00000501011 607 ntTSL 1 (best)10.19□□□□□ -0.789e-7■□□□□ 10.5
PRPF8Q6P2Q9 NISCH-204ENST00000464280 833 ntTSL 39.98□□□□□ -0.819e-7■□□□□ 10.5
PRPF8Q6P2Q9 WDR24-202ENST00000293883 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.879e-7■□□□□ 10.5
PRPF8Q6P2Q9 KNSTRN-209ENST00000560220 903 ntTSL 59.54□□□□□ -0.889e-7■□□□□ 10.5
PRPF8Q6P2Q9 ZBTB20-212ENST00000474710 2757 ntTSL 1 (best) BASIC9.47□□□□□ -0.899e-7■□□□□ 10.5
PRPF8Q6P2Q9 KNSTRN-203ENST00000448395 1464 ntTSL 2 BASIC9.45□□□□□ -0.99e-7■□□□□ 10.5
PRPF8Q6P2Q9 GANAB-213ENST00000534422 702 ntTSL 59.37□□□□□ -0.913e-9■□□□□ 10.5
PRPF8Q6P2Q9 KNSTRN-204ENST00000557920 651 ntTSL 39.21□□□□□ -0.949e-7■□□□□ 10.5
PRPF8Q6P2Q9 RAB30-AS1-206ENST00000533528 340 ntTSL 59.17□□□□□ -0.949e-7■□□□□ 10.5
PRPF8Q6P2Q9 KNSTRN-206ENST00000559304 664 ntTSL 39.15□□□□□ -0.959e-7■□□□□ 10.5
PRPF8Q6P2Q9 KNSTRN-207ENST00000559591 665 ntTSL 29.15□□□□□ -0.959e-7■□□□□ 10.5
PRPF8Q6P2Q9 FARP1-222ENST00000597777 3841 nt8.93□□□□□ -0.982e-16■□□□□ 10.5
PRPF8Q6P2Q9 MKS1-212ENST00000583577 697 ntTSL 28.91□□□□□ -0.989e-7■□□□□ 10.5
PRPF8Q6P2Q9 MOCS1-203ENST00000373186 4256 ntTSL 1 (best) BASIC8.87□□□□□ -0.999e-7■□□□□ 10.5
PRPF8Q6P2Q9 KNSTRN-216ENST00000608100 1495 ntTSL 1 (best) BASIC8.85□□□□□ -0.999e-7■□□□□ 10.5
PRPF8Q6P2Q9 DCAF12-202ENST00000396990 803 ntTSL 38.77□□□□□ -19e-7■□□□□ 10.5
PRPF8Q6P2Q9 TLK1-208ENST00000466220 346 ntTSL 48.61□□□□□ -1.039e-7■□□□□ 10.5
PRPF8Q6P2Q9 GTF3C2-213ENST00000495298 1064 ntTSL 28.5□□□□□ -1.051e-6■□□□□ 10.5
PRPF8Q6P2Q9 DCAF12-201ENST00000361264 3667 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.069e-7■□□□□ 10.5
PRPF8Q6P2Q9 IRX3-202ENST00000558054 444 ntTSL 28.24□□□□□ -1.094e-6■□□□□ 10.5
PRPF8Q6P2Q9 FAM120B-202ENST00000496635 739 ntTSL 28.19□□□□□ -1.19e-7■□□□□ 10.5
PRPF8Q6P2Q9 KNSTRN-205ENST00000559083 405 ntTSL 38.12□□□□□ -1.119e-7■□□□□ 10.5
PRPF8Q6P2Q9 SLC41A3-208ENST00000506102 2351 ntTSL 28.12□□□□□ -1.119e-7■□□□□ 10.5
PRPF8Q6P2Q9 DCAF12-203ENST00000450964 676 ntTSL 57.54□□□□□ -1.29e-7■□□□□ 10.5
PRPF8Q6P2Q9 SLC41A3-216ENST00000512557 3828 ntTSL 27.39□□□□□ -1.239e-7■□□□□ 10.5
PRPF8Q6P2Q9 MYLK-214ENST00000510775 525 ntTSL 47.14□□□□□ -1.279e-7■□□□□ 10.5
PRPF8Q6P2Q9 PTPA-211ENST00000417504 567 ntTSL 46.72□□□□□ -1.339e-7■□□□□ 10.5
PRPF8Q6P2Q9 EPS15-208ENST00000486505 631 ntTSL 56.47□□□□□ -1.379e-7■□□□□ 10.5
PRPF8Q6P2Q9 SLC30A10-204ENST00000484239 1902 ntTSL 26.44□□□□□ -1.389e-7■□□□□ 10.5
PRPF8Q6P2Q9 ADNP2-205ENST00000561195 124 ntTSL 36.34□□□□□ -1.399e-7■□□□□ 10.5
PRPF8Q6P2Q9 CHURC1-FNTB-204ENST00000553743 207 ntTSL 26.32□□□□□ -1.49e-7■□□□□ 10.5
PRPF8Q6P2Q9 PTPA-221ENST00000440346 490 ntTSL 46.2□□□□□ -1.429e-7■□□□□ 10.5
PRPF8Q6P2Q9 ATP1A1-206ENST00000463382 584 ntTSL 26.14□□□□□ -1.433e-11■□□□□ 10.5
PRPF8Q6P2Q9 STX6-202ENST00000469135 4842 ntTSL 1 (best)5.99□□□□□ -1.459e-7■□□□□ 10.5
PRPF8Q6P2Q9 PDS5A-204ENST00000503867 640 ntTSL 25.22□□□□□ -1.579e-7■□□□□ 10.5
PRPF8Q6P2Q9 LAMTOR5-AS1-238ENST00000626572 1044 ntTSL 54.77□□□□□ -1.656e-8■□□□□ 10.5
PRPF8Q6P2Q9 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.723e-11■□□□□ 10.5
PRPF8Q6P2Q9 ERAL1-205ENST00000577942 698 ntTSL 24.12□□□□□ -1.759e-7■□□□□ 10.5
PRPF8Q6P2Q9 CRYBB2P1-203ENST00000415709 538 ntBASIC3.58□□□□□ -1.843e-11■□□□□ 10.5
PRPF8Q6P2Q9 MYLK-215ENST00000511058 356 ntTSL 33.58□□□□□ -1.849e-7■□□□□ 10.5
PRPF8Q6P2Q9 SEPHS1-204ENST00000425947 383 ntTSL 33.44□□□□□ -1.869e-7■□□□□ 10.5
PRPF8Q6P2Q9 ADNP2-203ENST00000560561 647 ntTSL 33.27□□□□□ -1.899e-7■□□□□ 10.5
PRPF8Q6P2Q9 XPC-203ENST00000452172 571 ntTSL 42.97□□□□□ -1.939e-7■□□□□ 10.5
PRPF8Q6P2Q9 PIP5K1A-214ENST00000481713 474 ntTSL 22.63□□□□□ -1.999e-7■□□□□ 10.5
PRPF8Q6P2Q9 PDS5A-209ENST00000512643 581 ntTSL 42.6□□□□□ -1.999e-7■□□□□ 10.5
PRPF8Q6P2Q9 CRNKL1-203ENST00000490258 733 ntTSL 22.51□□□□□ -2.019e-7■□□□□ 10.5
PRPF8Q6P2Q9 CHURC1-FNTB-202ENST00000551823 517 ntTSL 22.38□□□□□ -2.039e-7■□□□□ 10.5
PRPF8Q6P2Q9 TLK1-209ENST00000470340 521 ntTSL 42.14□□□□□ -2.079e-7■□□□□ 10.5
PRPF8Q6P2Q9 PKN2-204ENST00000436111 632 ntTSL 31.83□□□□□ -2.129e-7■□□□□ 10.5
PRPF8Q6P2Q9 ECT2-213ENST00000460860 497 ntTSL 31.74□□□□□ -2.139e-7■□□□□ 10.5
PRPF8Q6P2Q9 G2E3-205ENST00000547638 566 ntTSL 41.48□□□□□ -2.179e-7■□□□□ 10.5
PRPF8Q6P2Q9 FBXO38-204ENST00000502571 605 ntTSL 21.43□□□□□ -2.189e-7■□□□□ 10.5
PRPF8Q6P2Q9 ARFGEF2-202ENST00000493140 245 ntTSL 21.37□□□□□ -2.199e-7■□□□□ 10.5
PRPF8Q6P2Q9 CRNKL1-206ENST00000521379 673 ntTSL 51.09□□□□□ -2.239e-7■□□□□ 10.5
PRPF8Q6P2Q9 ECT2-209ENST00000437296 2266 ntTSL 50.53□□□□□ -2.329e-7■□□□□ 10.5
PRPF8Q6P2Q9 SNORD63-201ENST00000384262 68 ntBASIC-2.2□□□□□ -2.769e-7■□□□□ 10.5
PRPF8Q6P2Q9 SPON2-208ENST00000504909 551 ntTSL 417.6■□□□□ 0.413e-7■□□□□ 10.5
PRPF8Q6P2Q9 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.123e-6■□□□□ 10.5
PRPF8Q6P2Q9 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.04□□□□□ -0.163e-6■□□□□ 10.5
PRPF8Q6P2Q9 PISD-204ENST00000422020 1015 ntTSL 59.63□□□□□ -0.879e-10■□□□□ 10.5
PRPF8Q6P2Q9 GATD1-207ENST00000526650 457 ntTSL 313.92□□□□□ -0.182e-7■□□□□ 10.5
PRPF8Q6P2Q9 GATD1-208ENST00000528309 510 ntTSL 312.64□□□□□ -0.392e-7■□□□□ 10.5
PRPF8Q6P2Q9 SGSH-208ENST00000572208 584 ntTSL 415.35■□□□□ 0.058e-7■□□□□ 10.5
PRPF8Q6P2Q9 SGSH-217ENST00000576941 578 ntTSL 415.35■□□□□ 0.058e-7■□□□□ 10.5
PRPF8Q6P2Q9 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.238e-7■□□□□ 10.5
PRPF8Q6P2Q9 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.09□□□□□ -0.318e-7■□□□□ 10.5
PRPF8Q6P2Q9 SGSH-204ENST00000571051 538 ntTSL 412.97□□□□□ -0.338e-7■□□□□ 10.5
PRPF8Q6P2Q9 SGSH-211ENST00000574505 587 ntTSL 511.48□□□□□ -0.578e-7■□□□□ 10.5
PRPF8Q6P2Q9 SGSH-213ENST00000575282 5562 ntTSL 1 (best)10.83□□□□□ -0.688e-7■□□□□ 10.5
PRPF8Q6P2Q9 SGSH-210ENST00000573150 2612 ntTSL 210.77□□□□□ -0.688e-7■□□□□ 10.5
PRPF8Q6P2Q9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.022e-7■□□□□ 10.5
PRPF8Q6P2Q9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.222e-7■□□□□ 10.5
PRPF8Q6P2Q9 FCGRT-218ENST00000600273 582 ntTSL 214.83□□□□□ -0.031e-19■□□□□ 10.5
PRPF8Q6P2Q9 FCGRT-216ENST00000599701 579 ntTSL 213.4□□□□□ -0.261e-19■□□□□ 10.5
PRPF8Q6P2Q9 FCGRT-213ENST00000598491 578 ntTSL 512.55□□□□□ -0.41e-19■□□□□ 10.5
PRPF8Q6P2Q9 SNORD12-201ENST00000391002 90 ntBASIC-0.13□□□□□ -2.435e-30■□□□□ 10.5
PRPF8Q6P2Q9 PHC2-208ENST00000473158 523 ntTSL 312.03□□□□□ -0.487e-9■□□□□ 10.5
PRPF8Q6P2Q9 ASNS-211ENST00000451771 562 ntTSL 216.45■□□□□ 0.225e-11■□□□□ 10.5
PRPF8Q6P2Q9 LCAT-207ENST00000575277 573 ntTSL 214.65□□□□□ -0.062e-10■□□□□ 10.5
PRPF8Q6P2Q9 ASNS-212ENST00000453600 573 ntTSL 312.31□□□□□ -0.445e-11■□□□□ 10.5
PRPF8Q6P2Q9 LCAT-202ENST00000570369 348 ntTSL 210.95□□□□□ -0.662e-10■□□□□ 10.5
PRPF8Q6P2Q9 SELENOP-205ENST00000508937 606 ntTSL 27.33□□□□□ -1.242e-11■□□□□ 10.5
PRPF8Q6P2Q9 SH3GLB2-204ENST00000416230 720 ntTSL 218.38■□□□□ 0.532e-8■□□□□ 10.5
PRPF8Q6P2Q9 FAHD2A-202ENST00000418606 715 ntTSL 315.01□□□□□ -0.012e-8■□□□□ 10.5
PRPF8Q6P2Q9 FAHD2A-203ENST00000445649 522 ntTSL 214.76□□□□□ -0.052e-8■□□□□ 10.5
PRPF8Q6P2Q9 SLC26A1-204ENST00000513138 265 ntTSL 39.64□□□□□ -0.872e-8■□□□□ 10.5
PRPF8Q6P2Q9 AP2A2-215ENST00000529427 345 ntTSL 316.52■□□□□ 0.235e-17■□□□□ 10.5
PRPF8Q6P2Q9 C16orf58-206ENST00000566148 441 ntTSL 211.25□□□□□ -0.615e-8■□□□□ 10.5
PRPF8Q6P2Q9 CDK16-222ENST00000523699 675 ntTSL 513.32□□□□□ -0.285e-8■□□□□ 10.5
PRPF8Q6P2Q9 LTBP3-204ENST00000525443 3162 ntTSL 210.91□□□□□ -0.663e-11■□□□□ 10.5
PRPF8Q6P2Q9 ODF2-216ENST00000483070 723 ntTSL 59.26□□□□□ -0.933e-11■□□□□ 10.5
PRPF8Q6P2Q9 TAF6-206ENST00000440225 871 ntTSL 319.01■□□□□ 0.636e-6■□□□□ 10.5
PRPF8Q6P2Q9 TAF6-216ENST00000493322 934 ntTSL 315.92■□□□□ 0.146e-6■□□□□ 10.5
PRPF8Q6P2Q9 TAF6-219ENST00000523306 751 ntTSL 514.35□□□□□ -0.116e-6■□□□□ 10.5
PRPF8Q6P2Q9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.196e-6■□□□□ 10.5
PRPF8Q6P2Q9 TAF6-215ENST00000487288 1195 ntTSL 512.88□□□□□ -0.356e-6■□□□□ 10.5
PRPF8Q6P2Q9 TAF6-203ENST00000421980 2685 ntTSL 512.82□□□□□ -0.366e-6■□□□□ 10.5
PRPF8Q6P2Q9 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.386e-6■□□□□ 10.5
PRPF8Q6P2Q9 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.566e-6■□□□□ 10.5
Retrieved 100 of 73,762 protein–RNA pairs in 749.2 ms