RNA–Protein interactions for RNA: ENST00000425947.1

SEPHS1-204, Transcript of selenophosphate synthetase 1, humanhuman

TSL 3

Gene SEPHS1, Length 383 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPHS1-204ENST00000425947 AEBP2Q6ZN18 517 aaPredicted RBP20.45■□□□□ 0.86
SEPHS1-204ENST00000425947 CHIC1Q5VXU3 224 aa20.2■□□□□ 0.82
SEPHS1-204ENST00000425947 PHF23Q9BUL5 403 aaPredicted RBP17.85■□□□□ 0.45
SEPHS1-204ENST00000425947 SENP3Q9H4L4 574 aaPredicted RBP17.25■□□□□ 0.35
SEPHS1-204ENST00000425947 PLPPR3Q6T4P5 718 aa16.53■□□□□ 0.24
SEPHS1-204ENST00000425947 FOXD1Q16676 465 aa16.03■□□□□ 0.16
SEPHS1-204ENST00000425947 ADRA2BP18089 450 aa15.7■□□□□ 0.1
SEPHS1-204ENST00000425947 PPP6R1Q9UPN7 881 aa15.68■□□□□ 0.1
SEPHS1-204ENST00000425947 PIAS4Q8N2W9 510 aaPredicted RBP15.18■□□□□ 0.02
SEPHS1-204ENST00000425947 PPP4R3CPQ6ZMV5 832 aa14.64□□□□□ -0.07
SEPHS1-204ENST00000425947 KCNA4P22459 653 aa14.63□□□□□ -0.07
SEPHS1-204ENST00000425947 MSH5O43196 834 aa14.6□□□□□ -0.07
SEPHS1-204ENST00000425947 NCBP3Q53F19 620 aaKnown RBP14.3□□□□□ -0.12
SEPHS1-204ENST00000425947 SCAF1Q9H7N4 1312 aaKnown RBP14.29□□□□□ -0.12
SEPHS1-204ENST00000425947 MAPK8IP2Q13387 824 aaPredicted RBP14.18□□□□□ -0.14
SEPHS1-204ENST00000425947 CNKSR2Q8WXI2 1034 aa14.13□□□□□ -0.15
SEPHS1-204ENST00000425947 NPM3O75607 178 aaKnown RBP14.12□□□□□ -0.15
SEPHS1-204ENST00000425947 SLC4A1APQ9BWU0 796 aaKnown RBP13.97□□□□□ -0.17
SEPHS1-204ENST00000425947 EHMT2Q96KQ7 1210 aa13.95□□□□□ -0.18
SEPHS1-204ENST00000425947 DMRT2Q9Y5R5 561 aa13.82□□□□□ -0.2
SEPHS1-204ENST00000425947 RNF216Q9NWF9 866 aaPredicted RBP13.77□□□□□ -0.21
SEPHS1-204ENST00000425947 HOXD11P31277 338 aaPredicted RBP13.63□□□□□ -0.23
SEPHS1-204ENST00000425947 CSRNP3Q8WYN3 585 aa13.63□□□□□ -0.23
SEPHS1-204ENST00000425947 DNAJC5BQ9UF47 199 aa13.52□□□□□ -0.25
SEPHS1-204ENST00000425947 ZBTB22O15209 634 aa13.46□□□□□ -0.25
SEPHS1-204ENST00000425947 FOXD4L1Q9NU39 408 aa13.34□□□□□ -0.27
SEPHS1-204ENST00000425947 DCAF8L1A6NGE4 600 aa13.32□□□□□ -0.28
SEPHS1-204ENST00000425947 SLC4A2P04920 1241 aa13.27□□□□□ -0.29
SEPHS1-204ENST00000425947 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.06□□□□□ -0.32
SEPHS1-204ENST00000425947 MYCNP04198 464 aaPredicted RBP13□□□□□ -0.33
SEPHS1-204ENST00000425947 POTEDQ86YR6 584 aa12.86□□□□□ -0.35
SEPHS1-204ENST00000425947 U3KPZ7 1027 aaPredicted RBP12.85□□□□□ -0.35
SEPHS1-204ENST00000425947 ATXN8OSP0DMR3 200 aa12.81□□□□□ -0.36
SEPHS1-204ENST00000425947 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.73□□□□□ -0.37
SEPHS1-204ENST00000425947 HNRNPUL2Q1KMD3 747 aaKnown RBP12.73□□□□□ -0.37
SEPHS1-204ENST00000425947 SAMD1Q6SPF0 538 aaPredicted RBP12.71□□□□□ -0.37
SEPHS1-204ENST00000425947 ATF5Q9Y2D1 282 aaPredicted RBP12.71□□□□□ -0.37
SEPHS1-204ENST00000425947 RNF39Q9H2S5 420 aa12.56□□□□□ -0.4
SEPHS1-204ENST00000425947 APLP2Q06481 763 aa12.52□□□□□ -0.41
SEPHS1-204ENST00000425947 SPINK5Q9NQ38 1064 aaPredicted RBP12.46□□□□□ -0.41
SEPHS1-204ENST00000425947 ZNF219Q9P2Y4 722 aaPredicted RBP12.45□□□□□ -0.42
SEPHS1-204ENST00000425947 TRHP20396 242 aaPredicted RBP12.42□□□□□ -0.42
SEPHS1-204ENST00000425947 C1QBPQ07021 282 aaKnown RBP12.41□□□□□ -0.42
SEPHS1-204ENST00000425947 CAPN15O75808 1086 aa12.39□□□□□ -0.43
SEPHS1-204ENST00000425947 FKBP8Q14318 412 aa12.32□□□□□ -0.44
SEPHS1-204ENST00000425947 POLA2Q14181 598 aa12.27□□□□□ -0.45
SEPHS1-204ENST00000425947 ABCB7O75027 752 aa12.19□□□□□ -0.46
SEPHS1-204ENST00000425947 MKRN4PQ13434 485 aaPredicted RBP12.14□□□□□ -0.47
SEPHS1-204ENST00000425947 FBLN2P98095 1184 aa12.11□□□□□ -0.47
SEPHS1-204ENST00000425947 CACNB1Q02641 598 aaPredicted RBP12.09□□□□□ -0.47
SEPHS1-204ENST00000425947 DSG3P32926 999 aa12.08□□□□□ -0.48
SEPHS1-204ENST00000425947 SPDYE4A6NLX3 237 aa12.01□□□□□ -0.49
SEPHS1-204ENST00000425947 ZBTB12Q9Y330 459 aaPredicted RBP11.98□□□□□ -0.49
SEPHS1-204ENST00000425947 OSCARQ8IYS5 282 aa11.8□□□□□ -0.52
SEPHS1-204ENST00000425947 PROM2Q8N271 834 aa11.77□□□□□ -0.53
SEPHS1-204ENST00000425947 ZNF692Q9BU19 519 aaPredicted RBP11.77□□□□□ -0.53
SEPHS1-204ENST00000425947 FBXO3Q9UK99 471 aa11.74□□□□□ -0.53
SEPHS1-204ENST00000425947 SPDYE2BA6NHP3 402 aa11.71□□□□□ -0.53
SEPHS1-204ENST00000425947 SPDYE6P0CI01 402 aa11.71□□□□□ -0.53
SEPHS1-204ENST00000425947 SPDYE2Q495Y8 402 aa11.71□□□□□ -0.53
SEPHS1-204ENST00000425947 RTN4Q9NQC3 1192 aaKnown RBP11.7□□□□□ -0.54
SEPHS1-204ENST00000425947 AMER1Q5JTC6 1135 aaPredicted RBP11.66□□□□□ -0.54
SEPHS1-204ENST00000425947 PABPN1Q86U42 306 aaKnown RBP eCLIP11.63□□□□□ -0.55
SEPHS1-204ENST00000425947 SSUH2Q9Y2M2 353 aa11.63□□□□□ -0.55
SEPHS1-204ENST00000425947 VASPP50552 380 aaPredicted RBP11.59□□□□□ -0.55
SEPHS1-204ENST00000425947 IFNLR1Q8IU57 520 aaPredicted RBP11.49□□□□□ -0.57
SEPHS1-204ENST00000425947 STAG3Q9UJ98 1225 aa11.46□□□□□ -0.57
SEPHS1-204ENST00000425947 RBM42Q9BTD8 480 aaKnown RBP11.45□□□□□ -0.58
SEPHS1-204ENST00000425947 MIER1Q8N108 512 aa11.4□□□□□ -0.58
SEPHS1-204ENST00000425947 KLHL34Q8N239 644 aa11.4□□□□□ -0.58
SEPHS1-204ENST00000425947 PLCD3Q8N3E9 789 aa11.4□□□□□ -0.58
SEPHS1-204ENST00000425947 AKT1S1Q96B36 256 aa11.39□□□□□ -0.59
SEPHS1-204ENST00000425947 CLEC11AQ9Y240 323 aa11.33□□□□□ -0.6
SEPHS1-204ENST00000425947 REM2Q8IYK8 340 aaPredicted RBP11.32□□□□□ -0.6
SEPHS1-204ENST00000425947 SPDYE1Q8NFV5 336 aaPredicted RBP11.31□□□□□ -0.6
SEPHS1-204ENST00000425947 SPOCK2Q92563 424 aa11.28□□□□□ -0.6
SEPHS1-204ENST00000425947 PLEKHG5O94827 1062 aa11.26□□□□□ -0.61
SEPHS1-204ENST00000425947 PRR29P0C7W0 189 aa11.23□□□□□ -0.61
SEPHS1-204ENST00000425947 PKD2Q13563 968 aa11.2□□□□□ -0.62
SEPHS1-204ENST00000425947 PITPNM1O00562 1244 aa11.18□□□□□ -0.62
SEPHS1-204ENST00000425947 ZBTB47Q9UFB7 747 aaPredicted RBP11.17□□□□□ -0.62
SEPHS1-204ENST00000425947 CREBZFQ9NS37 354 aa11.13□□□□□ -0.63
SEPHS1-204ENST00000425947 DCAF8L2P0C7V8 631 aa11.12□□□□□ -0.63
SEPHS1-204ENST00000425947 CIZ1Q9ULV3 898 aaPredicted RBP11.12□□□□□ -0.63
SEPHS1-204ENST00000425947 ECM2O94769 699 aaPredicted RBP11.1□□□□□ -0.63
SEPHS1-204ENST00000425947 MNX1P50219 401 aaPredicted RBP11.03□□□□□ -0.64
SEPHS1-204ENST00000425947 NUBP1P53384 320 aa11.03□□□□□ -0.64
SEPHS1-204ENST00000425947 CHADLQ6NUI6 762 aa11.02□□□□□ -0.65
SEPHS1-204ENST00000425947 DCAF8Q5TAQ9 597 aa11.01□□□□□ -0.65
SEPHS1-204ENST00000425947 SLC24A1O60721 1099 aa11□□□□□ -0.65
SEPHS1-204ENST00000425947 RGL2O15211 777 aa10.98□□□□□ -0.65
SEPHS1-204ENST00000425947 GSE1Q14687 1217 aa10.97□□□□□ -0.65
SEPHS1-204ENST00000425947 NPM1P06748 294 aaKnown RBP eCLIP10.94□□□□□ -0.66
SEPHS1-204ENST00000425947 PRKAR2AP13861 404 aaKnown RBP10.93□□□□□ -0.66
SEPHS1-204ENST00000425947 RASEFQ8IZ41 740 aa10.93□□□□□ -0.66
SEPHS1-204ENST00000425947 FAM212AQ96EL1 285 aa10.92□□□□□ -0.66
SEPHS1-204ENST00000425947 CHRDL2Q6WN34 429 aa10.9□□□□□ -0.66
SEPHS1-204ENST00000425947 FXR2P51116 673 aaKnown RBP eCLIP10.89□□□□□ -0.67
SEPHS1-204ENST00000425947 TRIM41Q8WV44 630 aa10.89□□□□□ -0.67
SEPHS1-204ENST00000425947 FARP1Q9Y4F1 1045 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms