Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 PSPC1P2-201ENST00000455130 225 ntBASIC7.59□□□□□ -1.19
UBE3AQ05086 UOX-201ENST00000471089 899 ntBASIC7.59□□□□□ -1.19
UBE3AQ05086 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC7.59□□□□□ -1.19
UBE3AQ05086 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC7.59□□□□□ -1.19
UBE3AQ05086 AC091563.1-201ENST00000520544 490 ntTSL 3 BASIC7.59□□□□□ -1.19
UBE3AQ05086 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
UBE3AQ05086 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC7.59□□□□□ -1.19
UBE3AQ05086 MIR378C-201ENST00000578683 81 ntBASIC7.59□□□□□ -1.19
UBE3AQ05086 MIR4271-201ENST00000582451 67 ntBASIC7.59□□□□□ -1.19
UBE3AQ05086 AC011447.2-201ENST00000592921 283 ntBASIC7.59□□□□□ -1.19
UBE3AQ05086 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC7.59□□□□□ -1.19
UBE3AQ05086 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC7.59□□□□□ -1.19
UBE3AQ05086 MIR7109-201ENST00000613748 65 ntBASIC7.59□□□□□ -1.19
UBE3AQ05086 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC7.59□□□□□ -1.19
UBE3AQ05086 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC7.59□□□□□ -1.19
UBE3AQ05086 AL034408.1-201ENST00000637712 664 ntBASIC7.59□□□□□ -1.19
UBE3AQ05086 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
UBE3AQ05086 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC7.59□□□□□ -1.19
UBE3AQ05086 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
UBE3AQ05086 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
UBE3AQ05086 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
UBE3AQ05086 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
UBE3AQ05086 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
UBE3AQ05086 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
UBE3AQ05086 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.2
UBE3AQ05086 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC7.59□□□□□ -1.2
UBE3AQ05086 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.59□□□□□ -1.2
UBE3AQ05086 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
UBE3AQ05086 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
UBE3AQ05086 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
UBE3AQ05086 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
UBE3AQ05086 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
UBE3AQ05086 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.58□□□□□ -1.2
UBE3AQ05086 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
UBE3AQ05086 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
UBE3AQ05086 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC7.58□□□□□ -1.2
UBE3AQ05086 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
UBE3AQ05086 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.58□□□□□ -1.2
UBE3AQ05086 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
UBE3AQ05086 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
UBE3AQ05086 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
UBE3AQ05086 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC7.58□□□□□ -1.2
UBE3AQ05086 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC7.58□□□□□ -1.2
UBE3AQ05086 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
UBE3AQ05086 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
UBE3AQ05086 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.58□□□□□ -1.2
UBE3AQ05086 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.58□□□□□ -1.2
UBE3AQ05086 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
UBE3AQ05086 RN7SKP189-201ENST00000365042 330 ntBASIC7.58□□□□□ -1.2
UBE3AQ05086 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
UBE3AQ05086 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC7.58□□□□□ -1.2
UBE3AQ05086 RPL34P19-201ENST00000415903 342 ntBASIC7.58□□□□□ -1.2
UBE3AQ05086 AC007365.2-201ENST00000428806 458 ntBASIC7.58□□□□□ -1.2
UBE3AQ05086 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
UBE3AQ05086 SNORA81.1-201ENST00000458922 177 ntBASIC7.58□□□□□ -1.2
UBE3AQ05086 RN7SL180P-201ENST00000466769 294 ntBASIC7.58□□□□□ -1.2
UBE3AQ05086 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC7.58□□□□□ -1.2
UBE3AQ05086 AC093878.1-201ENST00000515630 432 ntBASIC7.58□□□□□ -1.2
UBE3AQ05086 SCARNA6-201ENST00000515982 265 ntBASIC7.58□□□□□ -1.2
UBE3AQ05086 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC7.58□□□□□ -1.2
UBE3AQ05086 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC7.58□□□□□ -1.2
UBE3AQ05086 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.58□□□□□ -1.2
UBE3AQ05086 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.58□□□□□ -1.2
UBE3AQ05086 EIF4A3P1-201ENST00000578499 647 ntBASIC7.58□□□□□ -1.2
UBE3AQ05086 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC7.58□□□□□ -1.2
UBE3AQ05086 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.58□□□□□ -1.2
UBE3AQ05086 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC7.58□□□□□ -1.2
UBE3AQ05086 OR7A8P-201ENST00000595427 913 ntBASIC7.58□□□□□ -1.2
UBE3AQ05086 TEX41-271ENST00000628213 993 ntTSL 5 BASIC7.58□□□□□ -1.2
UBE3AQ05086 CREM-208ENST00000361599 2170 ntTSL 5 BASIC7.58□□□□□ -1.2
UBE3AQ05086 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
UBE3AQ05086 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.58□□□□□ -1.2
UBE3AQ05086 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
UBE3AQ05086 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
UBE3AQ05086 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
UBE3AQ05086 MRPS17P1-201ENST00000596009 3130 ntBASIC7.58□□□□□ -1.2
UBE3AQ05086 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
UBE3AQ05086 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
UBE3AQ05086 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
UBE3AQ05086 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
UBE3AQ05086 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
UBE3AQ05086 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
UBE3AQ05086 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
UBE3AQ05086 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC7.57□□□□□ -1.2
UBE3AQ05086 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
UBE3AQ05086 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.57□□□□□ -1.2
UBE3AQ05086 AC090643.1-201ENST00000623600 3100 ntBASIC7.57□□□□□ -1.2
UBE3AQ05086 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
UBE3AQ05086 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
UBE3AQ05086 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC7.57□□□□□ -1.2
UBE3AQ05086 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC7.57□□□□□ -1.2
UBE3AQ05086 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
UBE3AQ05086 AC010894.1-201ENST00000313760 361 ntBASIC7.57□□□□□ -1.2
UBE3AQ05086 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
UBE3AQ05086 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
UBE3AQ05086 RN7SKP250-201ENST00000363924 321 ntBASIC7.57□□□□□ -1.2
UBE3AQ05086 FAM204BP-201ENST00000369171 701 ntBASIC7.57□□□□□ -1.2
UBE3AQ05086 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC7.57□□□□□ -1.2
UBE3AQ05086 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
UBE3AQ05086 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms