Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC4.85□□□□□ -1.63
RPL39P62891 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
RPL39P62891 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
RPL39P62891 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RPL39P62891 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RPL39P62891 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC4.85□□□□□ -1.63
RPL39P62891 AC006213.6-201ENST00000623722 4179 ntBASIC4.85□□□□□ -1.63
RPL39P62891 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RPL39P62891 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC4.84□□□□□ -1.63
RPL39P62891 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RPL39P62891 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
RPL39P62891 AC010329.1-201ENST00000593903 8328 ntBASIC4.84□□□□□ -1.63
RPL39P62891 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
RPL39P62891 TMEM75-201ENST00000624314 2165 ntBASIC4.84□□□□□ -1.63
RPL39P62891 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RPL39P62891 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC4.84□□□□□ -1.63
RPL39P62891 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
RPL39P62891 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RPL39P62891 CETN2-201ENST00000370277 1454 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RPL39P62891 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RPL39P62891 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC4.84□□□□□ -1.63
RPL39P62891 AL606490.2-201ENST00000457562 1330 ntBASIC4.84□□□□□ -1.63
RPL39P62891 AL117378.2-201ENST00000622916 1337 ntBASIC4.84□□□□□ -1.63
RPL39P62891 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RPL39P62891 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC4.84□□□□□ -1.63
RPL39P62891 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
RPL39P62891 RN7SKP188-201ENST00000410789 317 ntBASIC4.84□□□□□ -1.63
RPL39P62891 AL353626.3-201ENST00000413399 657 ntBASIC4.84□□□□□ -1.63
RPL39P62891 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RPL39P62891 FDPSP8-201ENST00000438304 1089 ntBASIC4.84□□□□□ -1.63
RPL39P62891 AL049820.1-201ENST00000442936 423 ntTSL 2 BASIC4.84□□□□□ -1.63
RPL39P62891 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC4.84□□□□□ -1.63
RPL39P62891 RN7SL791P-201ENST00000467868 295 ntBASIC4.84□□□□□ -1.63
RPL39P62891 RN7SL621P-201ENST00000472565 299 ntBASIC4.84□□□□□ -1.63
RPL39P62891 RN7SL368P-201ENST00000473384 277 ntBASIC4.84□□□□□ -1.63
RPL39P62891 RN7SL549P-201ENST00000478997 282 ntBASIC4.84□□□□□ -1.63
RPL39P62891 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC4.84□□□□□ -1.63
RPL39P62891 RN7SL561P-201ENST00000488553 281 ntBASIC4.84□□□□□ -1.63
RPL39P62891 AC021220.1-201ENST00000507445 630 ntBASIC4.84□□□□□ -1.63
RPL39P62891 AC006070.1-201ENST00000508151 193 ntBASIC4.84□□□□□ -1.63
RPL39P62891 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC4.84□□□□□ -1.63
RPL39P62891 AP006587.5-201ENST00000532033 739 ntBASIC4.84□□□□□ -1.63
RPL39P62891 AC068631.3-201ENST00000538831 225 ntBASIC4.84□□□□□ -1.63
RPL39P62891 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RPL39P62891 NDUFA3P4-201ENST00000560814 250 ntBASIC4.84□□□□□ -1.63
RPL39P62891 EEF1B2P1-201ENST00000567221 672 ntBASIC4.84□□□□□ -1.63
RPL39P62891 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC4.84□□□□□ -1.63
RPL39P62891 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC4.84□□□□□ -1.63
RPL39P62891 MIR3689F-201ENST00000579617 66 ntBASIC4.84□□□□□ -1.63
RPL39P62891 MIR5192-201ENST00000579892 92 ntBASIC4.84□□□□□ -1.63
RPL39P62891 MIR4664-201ENST00000583819 71 ntBASIC4.84□□□□□ -1.63
RPL39P62891 LINC00663-205ENST00000589508 432 ntTSL 3 BASIC4.84□□□□□ -1.63
RPL39P62891 AC011447.3-205ENST00000592022 1268 ntTSL 3 BASIC4.84□□□□□ -1.63
RPL39P62891 OR7A11P-201ENST00000597719 953 ntBASIC4.84□□□□□ -1.63
RPL39P62891 AL953862.2-201ENST00000603089 820 ntBASIC4.84□□□□□ -1.63
RPL39P62891 AC078909.2-201ENST00000620584 398 ntBASIC4.84□□□□□ -1.63
RPL39P62891 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.63
RPL39P62891 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RPL39P62891 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RPL39P62891 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RPL39P62891 PARP4P1-201ENST00000435945 2337 ntBASIC4.84□□□□□ -1.64
RPL39P62891 TEK-204ENST00000519097 3836 ntTSL 2 BASIC4.84□□□□□ -1.64
RPL39P62891 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC4.84□□□□□ -1.64
RPL39P62891 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
RPL39P62891 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC4.84□□□□□ -1.64
RPL39P62891 SCFD1-202ENST00000396629 2021 ntTSL 2 BASIC4.84□□□□□ -1.64
RPL39P62891 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RPL39P62891 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC4.83□□□□□ -1.64
RPL39P62891 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
RPL39P62891 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RPL39P62891 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
RPL39P62891 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
RPL39P62891 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPL39P62891 AL662795.2-201ENST00000624252 3706 ntBASIC4.83□□□□□ -1.64
RPL39P62891 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RPL39P62891 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RPL39P62891 CREM-218ENST00000460270 1416 ntTSL 2 BASIC4.83□□□□□ -1.64
RPL39P62891 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPL39P62891 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC4.83□□□□□ -1.64
RPL39P62891 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RPL39P62891 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RPL39P62891 RPL24P4-201ENST00000326586 421 ntBASIC4.83□□□□□ -1.64
RPL39P62891 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPL39P62891 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPL39P62891 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RPL39P62891 RN7SKP47-201ENST00000365347 328 ntBASIC4.83□□□□□ -1.64
RPL39P62891 RPL12P1-201ENST00000374520 498 ntBASIC4.83□□□□□ -1.64
RPL39P62891 RNA5SP297-201ENST00000391029 113 ntBASIC4.83□□□□□ -1.64
RPL39P62891 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RPL39P62891 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RPL39P62891 MSRB1P1-201ENST00000396851 354 ntBASIC4.83□□□□□ -1.64
RPL39P62891 AL390039.1-201ENST00000399148 611 ntBASIC4.83□□□□□ -1.64
RPL39P62891 CES5AP1-201ENST00000400418 859 ntBASIC4.83□□□□□ -1.64
RPL39P62891 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC4.83□□□□□ -1.64
RPL39P62891 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC4.83□□□□□ -1.64
RPL39P62891 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC4.83□□□□□ -1.64
RPL39P62891 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC4.83□□□□□ -1.64
RPL39P62891 HCG25-217ENST00000422366 702 ntTSL 3 BASIC4.83□□□□□ -1.64
RPL39P62891 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC4.83□□□□□ -1.64
RPL39P62891 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms