Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.6□□□□□ -1.19
SSR1P43307 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SSR1P43307 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SSR1P43307 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.6□□□□□ -1.19
SSR1P43307 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SSR1P43307 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SSR1P43307 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SSR1P43307 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SSR1P43307 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SSR1P43307 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC7.59□□□□□ -1.19
SSR1P43307 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SSR1P43307 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
SSR1P43307 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
SSR1P43307 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
SSR1P43307 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
SSR1P43307 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SSR1P43307 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
SSR1P43307 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC7.59□□□□□ -1.19
SSR1P43307 IFNA12P-201ENST00000413147 571 ntBASIC7.59□□□□□ -1.19
SSR1P43307 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC7.59□□□□□ -1.19
SSR1P43307 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC7.59□□□□□ -1.19
SSR1P43307 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC7.59□□□□□ -1.19
SSR1P43307 OR3B1P-201ENST00000437536 893 ntBASIC7.59□□□□□ -1.19
SSR1P43307 DEFA11P-201ENST00000446470 261 ntBASIC7.59□□□□□ -1.19
SSR1P43307 ATP5G1P6-201ENST00000451206 412 ntBASIC7.59□□□□□ -1.19
SSR1P43307 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC7.59□□□□□ -1.19
SSR1P43307 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC7.59□□□□□ -1.19
SSR1P43307 RN7SL516P-201ENST00000496127 297 ntBASIC7.59□□□□□ -1.19
SSR1P43307 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.59□□□□□ -1.19
SSR1P43307 OR4A1P-201ENST00000532342 920 ntBASIC7.59□□□□□ -1.19
SSR1P43307 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC7.59□□□□□ -1.19
SSR1P43307 HIGD1AP9-201ENST00000550710 279 ntBASIC7.59□□□□□ -1.19
SSR1P43307 CRADD-210ENST00000552033 622 ntTSL 3 BASIC7.59□□□□□ -1.19
SSR1P43307 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC7.59□□□□□ -1.19
SSR1P43307 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC7.59□□□□□ -1.19
SSR1P43307 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC7.59□□□□□ -1.19
SSR1P43307 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SSR1P43307 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SSR1P43307 BOLA2P1-201ENST00000584794 232 ntBASIC7.59□□□□□ -1.19
SSR1P43307 AC020765.1-201ENST00000604296 328 ntBASIC7.59□□□□□ -1.19
SSR1P43307 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SSR1P43307 AC106795.5-201ENST00000623288 454 ntBASIC7.59□□□□□ -1.19
SSR1P43307 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.59□□□□□ -1.19
SSR1P43307 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SSR1P43307 AC034229.2-201ENST00000566945 2508 ntBASIC7.59□□□□□ -1.19
SSR1P43307 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SSR1P43307 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC7.59□□□□□ -1.19
SSR1P43307 LINC01808-203ENST00000641932 1643 ntBASIC7.59□□□□□ -1.19
SSR1P43307 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SSR1P43307 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SSR1P43307 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
SSR1P43307 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SSR1P43307 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.59□□□□□ -1.19
SSR1P43307 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
SSR1P43307 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.59□□□□□ -1.2
SSR1P43307 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
SSR1P43307 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.2
SSR1P43307 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SSR1P43307 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC7.58□□□□□ -1.2
SSR1P43307 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SSR1P43307 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SSR1P43307 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SSR1P43307 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC7.58□□□□□ -1.2
SSR1P43307 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SSR1P43307 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
SSR1P43307 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC7.58□□□□□ -1.2
SSR1P43307 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC7.58□□□□□ -1.2
SSR1P43307 MIR4435-2HG-205ENST00000431385 843 ntTSL 3 BASIC7.58□□□□□ -1.2
SSR1P43307 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC7.58□□□□□ -1.2
SSR1P43307 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC7.58□□□□□ -1.2
SSR1P43307 ARMC8P1-201ENST00000443069 1289 ntBASIC7.58□□□□□ -1.2
SSR1P43307 GTF2F2P2-201ENST00000445825 721 ntBASIC7.58□□□□□ -1.2
SSR1P43307 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.58□□□□□ -1.2
SSR1P43307 RPL7P14-201ENST00000449851 741 ntBASIC7.58□□□□□ -1.2
SSR1P43307 TCEAL4P1-201ENST00000453620 588 ntBASIC7.58□□□□□ -1.2
SSR1P43307 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SSR1P43307 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC7.58□□□□□ -1.2
SSR1P43307 AC021074.2-201ENST00000468434 172 ntBASIC7.58□□□□□ -1.2
SSR1P43307 B4GALT4-209ENST00000471675 712 ntTSL 3 BASIC7.58□□□□□ -1.2
SSR1P43307 RPL7AP56-201ENST00000476420 791 ntBASIC7.58□□□□□ -1.2
SSR1P43307 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC7.58□□□□□ -1.2
SSR1P43307 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.58□□□□□ -1.2
SSR1P43307 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC7.58□□□□□ -1.2
SSR1P43307 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.58□□□□□ -1.2
SSR1P43307 AC137695.2-201ENST00000603123 754 ntBASIC7.58□□□□□ -1.2
SSR1P43307 AC010320.5-201ENST00000619124 676 ntBASIC7.58□□□□□ -1.2
SSR1P43307 AC087072.2-201ENST00000621060 682 ntBASIC7.58□□□□□ -1.2
SSR1P43307 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.58□□□□□ -1.2
SSR1P43307 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC7.58□□□□□ -1.2
SSR1P43307 MAPK10-365ENST00000641902 3825 ntBASIC7.58□□□□□ -1.2
SSR1P43307 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
SSR1P43307 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SSR1P43307 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.58□□□□□ -1.2
SSR1P43307 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.58□□□□□ -1.2
SSR1P43307 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SSR1P43307 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
SSR1P43307 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
SSR1P43307 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SSR1P43307 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SSR1P43307 AC008957.3-201ENST00000624112 2242 ntBASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms