Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 CNTNAP4-202ENST00000377504 4723 ntTSL 5 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 FRRS1-201ENST00000287474 2678 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 TBX5-201ENST00000310346 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 TDP1-203ENST00000393454 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CUEDC1Q9NWM3 AP000542.3-201ENST00000623391 6114 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 TRAF3IP2-AS1-209ENST00000532226 2191 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 FTO-222ENST00000637969 2889 ntTSL 5 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 SNX27-201ENST00000368838 1308 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 KYNUP3-201ENST00000574386 1341 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 SRPK2-214ENST00000489828 2560 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 GINS1-201ENST00000262460 3249 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 HMSD-201ENST00000408945 2101 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 WDR44-203ENST00000371825 4029 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 SIRPD-202ENST00000381623 1958 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 EHHADH-AS1-201ENST00000417720 1416 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 FPR3-202ENST00000595991 2222 ntAPPRIS P1 TSL 4 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 ODF1-201ENST00000285402 1013 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 OR14I1-201ENST00000342623 936 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 SNORA58.1-201ENST00000364133 136 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 VTRNA1-2-201ENST00000365241 89 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 RIT1-201ENST00000368322 855 ntTSL 3 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 Y_RNA.472-201ENST00000384322 102 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 ST13P16-201ENST00000401760 781 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 AC007899.1-201ENST00000412776 775 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 NPM1P4-201ENST00000414095 812 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 AC005999.1-201ENST00000414409 588 ntTSL 4 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 LINC00630-202ENST00000420471 838 ntTSL 3 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 RPS27AP7-201ENST00000422792 455 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 RPL5P4-201ENST00000434805 886 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 TMEM127-203ENST00000435268 582 ntTSL 3 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 LINC02093-201ENST00000440522 485 ntTSL 5 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 MTND1P30-201ENST00000441241 901 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 CCNJP1-201ENST00000450600 1149 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 SPATA24-203ENST00000451821 646 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 AC004448.4-203ENST00000456537 441 ntTSL 3 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 CFTRP1-201ENST00000456646 183 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 AC055758.2-202ENST00000482351 624 ntTSL 2 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 RN7SL280P-201ENST00000496490 288 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 PRELID3BP4-201ENST00000515476 571 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 FABP5P5-201ENST00000515537 406 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 AC022730.3-201ENST00000521051 736 ntTSL 5 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 ERLIN2-210ENST00000523107 771 ntTSL 3 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 AP003122.1-201ENST00000527402 755 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 AP000820.1-201ENST00000545912 506 ntTSL 3 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 AKIRIN1P1-201ENST00000547384 544 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 AC087465.1-201ENST00000560574 245 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 AC138907.5-201ENST00000561744 273 ntTSL 5 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 AC138907.7-202ENST00000565347 540 ntTSL 4 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 AC021483.2-201ENST00000567415 758 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 AC141257.2-201ENST00000569199 540 ntTSL 5 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 AC007221.1-201ENST00000570038 796 ntTSL 5 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 RN7SL664P-201ENST00000584239 305 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 EIF5AP3-201ENST00000589460 462 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 AC087045.1-201ENST00000605856 382 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 AC016877.3-201ENST00000606778 504 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 AC072046.2-201ENST00000618366 268 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 AC119619.1-201ENST00000619728 112 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 AC130456.6-201ENST00000623745 765 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 OR10AB1P-202ENST00000641219 1686 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 NKAIN2-202ENST00000368417 3115 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 RRN3-201ENST00000198767 3762 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 DDAH1-202ENST00000426972 4017 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 STX2-203ENST00000392373 2151 ntAPPRIS P4 TSL 5 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 TAPT1-AS1-201ENST00000570786 2165 ntTSL 5 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 TMEM43-201ENST00000306077 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 PREPL-204ENST00000409272 3030 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 SCYL2-211ENST00000635101 3948 ntTSL 5 BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 NR1I3-205ENST00000367983 1473 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 AC096642.1-201ENST00000612055 2614 ntBASIC8.32□□□□□ -1.08
CUEDC1Q9NWM3 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 WDR11-AS1-203ENST00000598981 2242 ntTSL 5 BASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 HSP90AB7P-201ENST00000450068 2454 ntBASIC8.31□□□□□ -1.08
CUEDC1Q9NWM3 MAPK10-301ENST00000641313 2482 ntBASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms