Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 AC093783.1-201ENST00000612976 329 ntBASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 AC016911.1-201ENST00000613297 452 ntBASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 AC022960.3-201ENST00000619794 441 ntBASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 RBMY1A3P-201ENST00000382670 1404 ntBASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 SNORA11D-201ENST00000408548 128 ntBASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 SNORA11E-201ENST00000408778 128 ntBASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 AL359633.1-201ENST00000421403 310 ntBASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 AC114928.1-201ENST00000446516 415 ntBASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 CYCSP44-201ENST00000448560 313 ntBASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 TVP23BP2-201ENST00000455082 615 ntBASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 PABPC1P10-201ENST00000464731 381 ntBASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 AC026336.1-201ENST00000466577 351 ntBASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 TUBBP11-201ENST00000472255 252 ntBASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 RPL21P42-201ENST00000488408 464 ntBASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 AC018639.1-201ENST00000492994 442 ntBASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 AC098862.1-201ENST00000504991 413 ntBASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 LDHAP1-201ENST00000509421 992 ntBASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 NACAP6-201ENST00000509572 622 ntBASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 LINC01085-203ENST00000511195 326 ntBASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 RNA5SP518-201ENST00000515957 119 ntBASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 AC090971.3-201ENST00000557871 1041 ntBASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 ULK4P2-202ENST00000564187 492 ntBASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 CCDC58P1-201ENST00000578567 430 ntBASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 AL031777.2-201ENST00000611953 196 ntBASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 AC136428.4-201ENST00000634254 1155 ntBASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 AC090774.4-201ENST00000578888 1372 ntBASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 AP003119.3-201ENST00000566747 4192 ntBASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.54□□□□□ -1.2
CDK5RAP1Q96SZ6 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDK5RAP1Q96SZ6 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC7.53□□□□□ -1.2
CDK5RAP1Q96SZ6 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDK5RAP1Q96SZ6 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
CDK5RAP1Q96SZ6 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
CDK5RAP1Q96SZ6 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDK5RAP1Q96SZ6 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC7.53□□□□□ -1.2
CDK5RAP1Q96SZ6 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDK5RAP1Q96SZ6 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC7.53□□□□□ -1.2
CDK5RAP1Q96SZ6 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDK5RAP1Q96SZ6 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.53□□□□□ -1.2
CDK5RAP1Q96SZ6 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CDK5RAP1Q96SZ6 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
CDK5RAP1Q96SZ6 NPM1P14-201ENST00000343743 866 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms