Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RNA5SP172-201ENST00000365061 118 ntBASIC8.4□□□□□ -1.06
SNED1Q8TER0 RNU1-55P-201ENST00000365510 158 ntBASIC8.4□□□□□ -1.06
SNED1Q8TER0 TINAG-202ENST00000370864 692 ntTSL 2 BASIC8.4□□□□□ -1.06
SNED1Q8TER0 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SNED1Q8TER0 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
SNED1Q8TER0 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC8.4□□□□□ -1.06
SNED1Q8TER0 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC8.4□□□□□ -1.06
SNED1Q8TER0 ANKRD54P1-201ENST00000433115 471 ntBASIC8.4□□□□□ -1.06
SNED1Q8TER0 SDHCP3-201ENST00000445371 506 ntBASIC8.4□□□□□ -1.06
SNED1Q8TER0 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC8.4□□□□□ -1.06
SNED1Q8TER0 RN7SL870P-201ENST00000460111 296 ntBASIC8.4□□□□□ -1.06
SNED1Q8TER0 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC8.4□□□□□ -1.06
SNED1Q8TER0 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC8.4□□□□□ -1.06
SNED1Q8TER0 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC8.4□□□□□ -1.06
SNED1Q8TER0 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC8.4□□□□□ -1.06
SNED1Q8TER0 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC8.4□□□□□ -1.06
SNED1Q8TER0 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC8.4□□□□□ -1.06
SNED1Q8TER0 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC8.4□□□□□ -1.06
SNED1Q8TER0 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC8.4□□□□□ -1.06
SNED1Q8TER0 AC245052.7-201ENST00000601161 359 ntBASIC8.4□□□□□ -1.06
SNED1Q8TER0 AC012175.1-201ENST00000603755 531 ntBASIC8.4□□□□□ -1.06
SNED1Q8TER0 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC8.4□□□□□ -1.06
SNED1Q8TER0 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC8.4□□□□□ -1.06
SNED1Q8TER0 ZNF806-201ENST00000438300 1774 ntBASIC8.4□□□□□ -1.06
SNED1Q8TER0 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC8.4□□□□□ -1.06
SNED1Q8TER0 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
SNED1Q8TER0 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC8.4□□□□□ -1.06
SNED1Q8TER0 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC8.4□□□□□ -1.06
SNED1Q8TER0 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
SNED1Q8TER0 TMCC1P1-201ENST00000518897 1980 ntBASIC8.4□□□□□ -1.06
SNED1Q8TER0 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC8.4□□□□□ -1.07
SNED1Q8TER0 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.07
SNED1Q8TER0 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
SNED1Q8TER0 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
SNED1Q8TER0 MBP-206ENST00000397863 4800 ntTSL 3 BASIC8.4□□□□□ -1.07
SNED1Q8TER0 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNED1Q8TER0 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
SNED1Q8TER0 RN7SKP275-201ENST00000364626 301 ntBASIC8.39□□□□□ -1.07
SNED1Q8TER0 AC005522.1-201ENST00000395416 346 ntBASIC8.39□□□□□ -1.07
SNED1Q8TER0 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC8.39□□□□□ -1.07
SNED1Q8TER0 AC099782.1-201ENST00000425889 474 ntBASIC8.39□□□□□ -1.07
SNED1Q8TER0 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC8.39□□□□□ -1.07
SNED1Q8TER0 RPS29P14-201ENST00000431518 171 ntBASIC8.39□□□□□ -1.07
SNED1Q8TER0 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC8.39□□□□□ -1.07
SNED1Q8TER0 PSMD10P2-201ENST00000432890 672 ntBASIC8.39□□□□□ -1.07
SNED1Q8TER0 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SNED1Q8TER0 UBBP5-201ENST00000446970 266 ntBASIC8.39□□□□□ -1.07
SNED1Q8TER0 MEF2AP1-201ENST00000454867 863 ntBASIC8.39□□□□□ -1.07
SNED1Q8TER0 RARRES2P3-201ENST00000457739 473 ntBASIC8.39□□□□□ -1.07
SNED1Q8TER0 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC8.39□□□□□ -1.07
SNED1Q8TER0 AC096743.1-201ENST00000485172 319 ntBASIC8.39□□□□□ -1.07
SNED1Q8TER0 AC117500.1-201ENST00000497352 755 ntBASIC8.39□□□□□ -1.07
SNED1Q8TER0 AC027801.3-201ENST00000515049 698 ntBASIC8.39□□□□□ -1.07
SNED1Q8TER0 IGKV3D-34-201ENST00000522638 302 ntBASIC8.39□□□□□ -1.07
SNED1Q8TER0 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC8.39□□□□□ -1.07
SNED1Q8TER0 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SNED1Q8TER0 NXPE2P1-201ENST00000543705 726 ntBASIC8.39□□□□□ -1.07
SNED1Q8TER0 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC8.39□□□□□ -1.07
SNED1Q8TER0 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC8.39□□□□□ -1.07
SNED1Q8TER0 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC8.39□□□□□ -1.07
SNED1Q8TER0 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC8.39□□□□□ -1.07
SNED1Q8TER0 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
SNED1Q8TER0 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC8.39□□□□□ -1.07
SNED1Q8TER0 CNTNAP3P1-201ENST00000616657 906 ntBASIC8.39□□□□□ -1.07
SNED1Q8TER0 MIR6721-201ENST00000617181 87 ntBASIC8.39□□□□□ -1.07
SNED1Q8TER0 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC8.39□□□□□ -1.07
SNED1Q8TER0 UOX-205ENST00000640983 544 ntTSL 4 BASIC8.39□□□□□ -1.07
SNED1Q8TER0 AP003972.1-201ENST00000625192 5446 ntBASIC8.39□□□□□ -1.07
SNED1Q8TER0 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
SNED1Q8TER0 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNED1Q8TER0 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNED1Q8TER0 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNED1Q8TER0 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SNED1Q8TER0 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SNED1Q8TER0 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNED1Q8TER0 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC8.39□□□□□ -1.07
SNED1Q8TER0 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNED1Q8TER0 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNED1Q8TER0 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNED1Q8TER0 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC8.39□□□□□ -1.07
SNED1Q8TER0 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
SNED1Q8TER0 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC8.39□□□□□ -1.07
SNED1Q8TER0 MED6-212ENST00000615788 1700 ntTSL 5 BASIC8.39□□□□□ -1.07
SNED1Q8TER0 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SNED1Q8TER0 CD46-209ENST00000367047 3089 ntTSL 5 BASIC8.38□□□□□ -1.07
SNED1Q8TER0 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC8.38□□□□□ -1.07
SNED1Q8TER0 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SNED1Q8TER0 PPIAP24-201ENST00000328558 471 ntBASIC8.38□□□□□ -1.07
SNED1Q8TER0 RNA5SP321-201ENST00000362722 111 ntBASIC8.38□□□□□ -1.07
SNED1Q8TER0 RBBP4P5-201ENST00000398583 1266 ntBASIC8.38□□□□□ -1.07
SNED1Q8TER0 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC8.38□□□□□ -1.07
SNED1Q8TER0 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC8.38□□□□□ -1.07
SNED1Q8TER0 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC8.38□□□□□ -1.07
SNED1Q8TER0 RN7SL413P-201ENST00000482700 297 ntBASIC8.38□□□□□ -1.07
SNED1Q8TER0 MTND6P16-201ENST00000504006 520 ntBASIC8.38□□□□□ -1.07
SNED1Q8TER0 AC146944.3-201ENST00000509969 371 ntBASIC8.38□□□□□ -1.07
SNED1Q8TER0 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC8.38□□□□□ -1.07
SNED1Q8TER0 SNRPCP6-201ENST00000528310 210 ntBASIC8.38□□□□□ -1.07
SNED1Q8TER0 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC8.38□□□□□ -1.07
SNED1Q8TER0 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms