Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SUPT16H-204ENST00000555943 915 ntTSL 2 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 MIR744-201ENST00000578242 98 ntBASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 RBM11P1-201ENST00000604951 799 ntBASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 AC023206.1-201ENST00000605824 298 ntBASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 MIR7162-201ENST00000611134 69 ntBASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 AL035661.1-201ENST00000620459 1144 ntBASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 SGO1P1-201ENST00000603525 1447 ntBASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 RBFOX2-207ENST00000414461 1706 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 LPP-208ENST00000448637 5835 ntTSL 5 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SHKBP1Q8TBC3 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 AC016930.1-201ENST00000468766 2205 ntBASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 AP003972.1-201ENST00000625192 5446 ntBASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 RNU6-304P-201ENST00000364855 107 ntBASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 SLC25A5P7-201ENST00000406156 896 ntBASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 BTF3L4P1-201ENST00000413813 468 ntBASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 AC013268.2-201ENST00000420753 337 ntBASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 AL121882.1-201ENST00000422893 417 ntBASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 DNAJA1P1-201ENST00000425106 1187 ntBASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 MTND4LP14-201ENST00000429447 288 ntBASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 VDAC2P3-201ENST00000430995 828 ntBASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 AL591379.2-201ENST00000450223 397 ntBASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 AC093719.1-201ENST00000480427 441 ntBASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 AL445187.1-201ENST00000502685 260 ntBASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 AC113352.1-201ENST00000513196 666 ntBASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 MTND6P19-201ENST00000519399 524 ntBASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 FOLH1B-202ENST00000529567 2145 ntBASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 RN7SL42P-201ENST00000579786 294 ntBASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 MTATP6P3-201ENST00000581686 676 ntBASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 AC007136.1-201ENST00000589141 199 ntBASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 SLC14A1-214ENST00000589700 1022 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 FXYD6P1-201ENST00000604857 285 ntBASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 FAM27E3-202ENST00000614611 340 ntBASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 LINC01748-205ENST00000635616 2143 ntTSL 5 BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 TATDN2P1-201ENST00000443767 2331 ntBASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC8.07□□□□□ -1.12
SHKBP1Q8TBC3 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms