Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 AC090643.1-201ENST00000623600 3100 ntBASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CDK5RAP1Q96SZ6 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 AL133320.1-201ENST00000621423 2352 ntBASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 AC006116.1-201ENST00000587908 2171 ntBASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 RNU12-2P-201ENST00000364789 156 ntBASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 RNA5SP302-201ENST00000364896 100 ntBASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 RN7SKP38-201ENST00000410782 309 ntBASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 AL139135.1-201ENST00000412675 209 ntBASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 AC104698.1-201ENST00000435671 276 ntBASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 AC114755.4-201ENST00000439114 443 ntBASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 RPL29P7-201ENST00000440227 457 ntBASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 PSPC1P2-201ENST00000455130 225 ntBASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 AC025271.1-201ENST00000485045 429 ntBASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 RN7SL776P-201ENST00000493390 268 ntBASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 AC008967.1-201ENST00000504843 163 ntBASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 OR8X1P-201ENST00000534542 869 ntBASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 PDCL3P1-201ENST00000534575 734 ntBASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 NDUFA3P4-201ENST00000560814 250 ntBASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 AC015801.1-201ENST00000585651 153 ntBASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 AC114878.2-201ENST00000604863 1251 ntBASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 AL161931.1-201ENST00000612768 246 ntBASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 AC016542.3-201ENST00000623520 619 ntBASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 AC007998.4-201ENST00000612496 2533 ntBASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 BX664727.3-202ENST00000421686 1761 ntTSL 5 BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
CDK5RAP1Q96SZ6 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 RNU4-40P-201ENST00000364351 143 ntBASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 RN7SKP257-201ENST00000364525 309 ntBASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 RNA5SP355-201ENST00000365317 135 ntBASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 ATP5F1P6-201ENST00000402768 767 ntBASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 NRIR-202ENST00000414795 506 ntTSL 3 BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 AL354983.1-201ENST00000434580 906 ntBASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 AC097523.2-201ENST00000435551 652 ntBASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 ZNF736P8Y-201ENST00000451913 669 ntBASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 FAM30C-201ENST00000561158 410 ntBASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 AC005951.1-201ENST00000576706 485 ntBASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 MIR4470-201ENST00000583453 72 ntBASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 AL512430.4-201ENST00000603085 613 ntBASIC7.55□□□□□ -1.2
CDK5RAP1Q96SZ6 AC139792.1-201ENST00000607051 647 ntBASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms