Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
AP3S2P59780 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
AP3S2P59780 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
AP3S2P59780 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
AP3S2P59780 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
AP3S2P59780 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
AP3S2P59780 RBMX2P2-201ENST00000257020 946 ntBASIC5.97□□□□□ -1.45
AP3S2P59780 RN7SKP75-201ENST00000363070 296 ntBASIC5.97□□□□□ -1.45
AP3S2P59780 RNA5SP65-201ENST00000363166 119 ntBASIC5.97□□□□□ -1.45
AP3S2P59780 FAM204BP-201ENST00000369171 701 ntBASIC5.97□□□□□ -1.45
AP3S2P59780 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
AP3S2P59780 SNORA70.9-201ENST00000384370 135 ntBASIC5.97□□□□□ -1.45
AP3S2P59780 TRBV6-1-201ENST00000390353 401 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
AP3S2P59780 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC5.97□□□□□ -1.45
AP3S2P59780 AC092952.1-201ENST00000397646 1209 ntBASIC5.97□□□□□ -1.45
AP3S2P59780 RPL7P58-201ENST00000402913 758 ntBASIC5.97□□□□□ -1.45
AP3S2P59780 AL109918.1-202ENST00000406724 436 ntBASIC5.97□□□□□ -1.45
AP3S2P59780 SNHG26-202ENST00000422542 1106 ntTSL 3 BASIC5.97□□□□□ -1.45
AP3S2P59780 AL391863.1-201ENST00000422776 743 ntTSL 3 BASIC5.97□□□□□ -1.45
AP3S2P59780 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC5.97□□□□□ -1.45
AP3S2P59780 AC092098.1-201ENST00000429245 874 ntBASIC5.97□□□□□ -1.45
AP3S2P59780 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC5.97□□□□□ -1.45
AP3S2P59780 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.97□□□□□ -1.45
AP3S2P59780 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC5.97□□□□□ -1.45
AP3S2P59780 AC104772.1-201ENST00000444764 862 ntBASIC5.97□□□□□ -1.45
AP3S2P59780 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC5.97□□□□□ -1.45
AP3S2P59780 RN7SL12P-201ENST00000473849 290 ntBASIC5.97□□□□□ -1.45
AP3S2P59780 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC5.97□□□□□ -1.45
AP3S2P59780 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
AP3S2P59780 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
AP3S2P59780 RN7SL580P-201ENST00000492489 287 ntBASIC5.97□□□□□ -1.45
AP3S2P59780 LINC00499-203ENST00000510736 587 ntTSL 5 BASIC5.97□□□□□ -1.45
AP3S2P59780 GAPDHP44-201ENST00000513513 1007 ntBASIC5.97□□□□□ -1.45
AP3S2P59780 AC091820.1-201ENST00000523497 648 ntTSL 4 BASIC5.97□□□□□ -1.45
AP3S2P59780 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC5.97□□□□□ -1.45
AP3S2P59780 OR4A13P-201ENST00000529316 942 ntBASIC5.97□□□□□ -1.45
AP3S2P59780 AC018554.2-201ENST00000563482 261 ntBASIC5.97□□□□□ -1.45
AP3S2P59780 MPHOSPH6-207ENST00000569021 392 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
AP3S2P59780 AC087645.1-201ENST00000588528 291 ntBASIC5.97□□□□□ -1.45
AP3S2P59780 BX649601.1-201ENST00000608264 572 ntBASIC5.97□□□□□ -1.45
AP3S2P59780 AC245028.3-201ENST00000618197 285 ntBASIC5.97□□□□□ -1.45
AP3S2P59780 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC5.97□□□□□ -1.45
AP3S2P59780 ZNHIT3-209ENST00000620324 834 ntTSL 2 BASIC5.97□□□□□ -1.45
AP3S2P59780 AP000356.4-201ENST00000639500 172 ntBASIC5.97□□□□□ -1.45
AP3S2P59780 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC5.97□□□□□ -1.45
AP3S2P59780 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
AP3S2P59780 AC004014.2-201ENST00000623718 5122 ntBASIC5.97□□□□□ -1.45
AP3S2P59780 RWDD1-204ENST00000487832 1427 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
AP3S2P59780 TRIM60P14-201ENST00000513444 1419 ntBASIC5.97□□□□□ -1.45
AP3S2P59780 AC068769.1-201ENST00000474767 2426 ntBASIC5.97□□□□□ -1.45
AP3S2P59780 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.97□□□□□ -1.45
AP3S2P59780 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
AP3S2P59780 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC5.97□□□□□ -1.45
AP3S2P59780 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
AP3S2P59780 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
AP3S2P59780 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
AP3S2P59780 MAPK10-261ENST00000641050 3109 ntBASIC5.96□□□□□ -1.45
AP3S2P59780 TPTE2P2-201ENST00000403471 1466 ntBASIC5.96□□□□□ -1.45
AP3S2P59780 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
AP3S2P59780 IKZF3-214ENST00000467757 1362 ntTSL 5 BASIC5.96□□□□□ -1.45
AP3S2P59780 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
AP3S2P59780 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
AP3S2P59780 SELE-203ENST00000367775 3389 ntTSL 5 BASIC5.96□□□□□ -1.46
AP3S2P59780 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
AP3S2P59780 AC007159.1-201ENST00000566529 4706 ntBASIC5.96□□□□□ -1.46
AP3S2P59780 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
AP3S2P59780 OCM-201ENST00000242104 695 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
AP3S2P59780 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
AP3S2P59780 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
AP3S2P59780 TAC1-203ENST00000350485 975 ntTSL 5 BASIC5.96□□□□□ -1.46
AP3S2P59780 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC5.96□□□□□ -1.46
AP3S2P59780 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
AP3S2P59780 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
AP3S2P59780 IMPG1-203ENST00000369963 868 ntTSL 5 BASIC5.96□□□□□ -1.46
AP3S2P59780 NPM1P46-201ENST00000399556 865 ntBASIC5.96□□□□□ -1.46
AP3S2P59780 VN1R66P-201ENST00000412929 916 ntBASIC5.96□□□□□ -1.46
AP3S2P59780 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.96□□□□□ -1.46
AP3S2P59780 PPIAP25-201ENST00000420177 540 ntBASIC5.96□□□□□ -1.46
AP3S2P59780 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC5.96□□□□□ -1.46
AP3S2P59780 AC245884.2-201ENST00000426257 404 ntBASIC5.96□□□□□ -1.46
AP3S2P59780 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.96□□□□□ -1.46
AP3S2P59780 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC5.96□□□□□ -1.46
AP3S2P59780 AC073900.1-201ENST00000429766 776 ntBASIC5.96□□□□□ -1.46
AP3S2P59780 BACE2-IT1-201ENST00000433378 382 ntTSL 5 BASIC5.96□□□□□ -1.46
AP3S2P59780 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC5.96□□□□□ -1.46
AP3S2P59780 RPL4P2-201ENST00000447259 1282 ntBASIC5.96□□□□□ -1.46
AP3S2P59780 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC5.96□□□□□ -1.46
AP3S2P59780 GSTO3P-201ENST00000504733 718 ntBASIC5.96□□□□□ -1.46
AP3S2P59780 SNORA58-201ENST00000505219 137 ntBASIC5.96□□□□□ -1.46
AP3S2P59780 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC5.96□□□□□ -1.46
AP3S2P59780 AC003991.2-201ENST00000520993 576 ntTSL 4 BASIC5.96□□□□□ -1.46
AP3S2P59780 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC5.96□□□□□ -1.46
AP3S2P59780 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC5.96□□□□□ -1.46
AP3S2P59780 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
AP3S2P59780 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.96□□□□□ -1.46
AP3S2P59780 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC5.96□□□□□ -1.46
AP3S2P59780 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
AP3S2P59780 AC008991.2-201ENST00000587850 487 ntTSL 3 BASIC5.96□□□□□ -1.46
AP3S2P59780 AC004852.1-201ENST00000605206 154 ntBASIC5.96□□□□□ -1.46
AP3S2P59780 AL451054.3-201ENST00000611115 776 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms