Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
RHBDL3P58872 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC8.4□□□□□ -1.07
RHBDL3P58872 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
RHBDL3P58872 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
RHBDL3P58872 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC8.4□□□□□ -1.07
RHBDL3P58872 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC8.4□□□□□ -1.07
RHBDL3P58872 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC8.4□□□□□ -1.07
RHBDL3P58872 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
RHBDL3P58872 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RHBDL3P58872 ATP5BP1-201ENST00000411980 1574 ntBASIC8.39□□□□□ -1.07
RHBDL3P58872 YES1-203ENST00000577961 4554 ntTSL 5 BASIC8.39□□□□□ -1.07
RHBDL3P58872 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC8.39□□□□□ -1.07
RHBDL3P58872 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
RHBDL3P58872 RBPJP6-201ENST00000411556 1431 ntBASIC8.39□□□□□ -1.07
RHBDL3P58872 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC8.39□□□□□ -1.07
RHBDL3P58872 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
RHBDL3P58872 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC8.39□□□□□ -1.07
RHBDL3P58872 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
RHBDL3P58872 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RHBDL3P58872 CR383656.5-201ENST00000547616 1340 ntBASIC8.39□□□□□ -1.07
RHBDL3P58872 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
RHBDL3P58872 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
RHBDL3P58872 AL359715.1-201ENST00000404330 555 ntBASIC8.39□□□□□ -1.07
RHBDL3P58872 AL136100.1-201ENST00000407696 330 ntBASIC8.39□□□□□ -1.07
RHBDL3P58872 RPSAP60-201ENST00000415403 880 ntBASIC8.39□□□□□ -1.07
RHBDL3P58872 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
RHBDL3P58872 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RHBDL3P58872 SPATA20P1-201ENST00000423089 438 ntBASIC8.39□□□□□ -1.07
RHBDL3P58872 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC8.39□□□□□ -1.07
RHBDL3P58872 LSM3P3-201ENST00000436601 306 ntBASIC8.39□□□□□ -1.07
RHBDL3P58872 AC245047.5-201ENST00000437312 556 ntBASIC8.39□□□□□ -1.07
RHBDL3P58872 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC8.39□□□□□ -1.07
RHBDL3P58872 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
RHBDL3P58872 AP002371.1-201ENST00000463604 433 ntBASIC8.39□□□□□ -1.07
RHBDL3P58872 AP005202.1-201ENST00000489915 867 ntBASIC8.39□□□□□ -1.07
RHBDL3P58872 AP000926.3-201ENST00000497201 299 ntBASIC8.39□□□□□ -1.07
RHBDL3P58872 AC139713.1-202ENST00000512366 460 ntBASIC8.39□□□□□ -1.07
RHBDL3P58872 IGLVV-66-201ENST00000523818 341 ntBASIC8.39□□□□□ -1.07
RHBDL3P58872 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
RHBDL3P58872 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC8.39□□□□□ -1.07
RHBDL3P58872 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
RHBDL3P58872 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC8.39□□□□□ -1.07
RHBDL3P58872 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC8.39□□□□□ -1.07
RHBDL3P58872 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC8.39□□□□□ -1.07
RHBDL3P58872 AL049840.6-201ENST00000604583 345 ntBASIC8.39□□□□□ -1.07
RHBDL3P58872 AC073488.2-201ENST00000631903 751 ntBASIC8.39□□□□□ -1.07
RHBDL3P58872 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC8.39□□□□□ -1.07
RHBDL3P58872 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
RHBDL3P58872 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
RHBDL3P58872 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC8.39□□□□□ -1.07
RHBDL3P58872 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC8.39□□□□□ -1.07
RHBDL3P58872 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
RHBDL3P58872 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
RHBDL3P58872 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC8.39□□□□□ -1.07
RHBDL3P58872 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RHBDL3P58872 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC8.39□□□□□ -1.07
RHBDL3P58872 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC8.39□□□□□ -1.07
RHBDL3P58872 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
RHBDL3P58872 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC8.38□□□□□ -1.07
RHBDL3P58872 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RHBDL3P58872 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC8.38□□□□□ -1.07
RHBDL3P58872 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
RHBDL3P58872 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
RHBDL3P58872 AC004023.1-201ENST00000561473 1744 ntBASIC8.38□□□□□ -1.07
RHBDL3P58872 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
RHBDL3P58872 ZNF493-201ENST00000339914 1665 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
RHBDL3P58872 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC8.38□□□□□ -1.07
RHBDL3P58872 AC008555.1-201ENST00000561778 2757 ntBASIC8.38□□□□□ -1.07
RHBDL3P58872 AC006511.2-201ENST00000388966 660 ntBASIC8.38□□□□□ -1.07
RHBDL3P58872 HNRNPH1P2-201ENST00000396845 1210 ntBASIC8.38□□□□□ -1.07
RHBDL3P58872 AL079341.1-201ENST00000404701 1207 ntBASIC8.38□□□□□ -1.07
RHBDL3P58872 VN1R3-201ENST00000418822 919 ntBASIC8.38□□□□□ -1.07
RHBDL3P58872 ETF1P1-206ENST00000427296 984 ntBASIC8.38□□□□□ -1.07
RHBDL3P58872 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
RHBDL3P58872 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC8.38□□□□□ -1.07
RHBDL3P58872 AC234771.4-201ENST00000441416 730 ntBASIC8.38□□□□□ -1.07
RHBDL3P58872 AL356121.1-201ENST00000442911 156 ntBASIC8.38□□□□□ -1.07
RHBDL3P58872 AC005165.2-201ENST00000466070 380 ntBASIC8.38□□□□□ -1.07
RHBDL3P58872 AC112184.1-201ENST00000505179 312 ntBASIC8.38□□□□□ -1.07
RHBDL3P58872 RNU4-18P-201ENST00000516751 149 ntBASIC8.38□□□□□ -1.07
RHBDL3P58872 IGLC4-201ENST00000517690 248 ntBASIC8.38□□□□□ -1.07
RHBDL3P58872 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC8.38□□□□□ -1.07
RHBDL3P58872 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC8.38□□□□□ -1.07
RHBDL3P58872 AC093283.1-201ENST00000565306 1075 ntBASIC8.38□□□□□ -1.07
RHBDL3P58872 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC8.38□□□□□ -1.07
RHBDL3P58872 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC8.38□□□□□ -1.07
RHBDL3P58872 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC8.38□□□□□ -1.07
RHBDL3P58872 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
RHBDL3P58872 AL513548.2-201ENST00000602994 1207 ntBASIC8.38□□□□□ -1.07
RHBDL3P58872 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC8.38□□□□□ -1.07
RHBDL3P58872 AC073857.1-201ENST00000625082 1054 ntBASIC8.38□□□□□ -1.07
RHBDL3P58872 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC8.38□□□□□ -1.07
RHBDL3P58872 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
RHBDL3P58872 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC8.38□□□□□ -1.07
RHBDL3P58872 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
RHBDL3P58872 AC006600.2-201ENST00000624834 2506 ntBASIC8.38□□□□□ -1.07
RHBDL3P58872 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
RHBDL3P58872 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC8.38□□□□□ -1.07
RHBDL3P58872 TPTE2P2-201ENST00000403471 1466 ntBASIC8.38□□□□□ -1.07
RHBDL3P58872 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms