Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 FRG2MP-201ENST00000613317 856 ntBASIC7.52□□□□□ -1.21
NEK3P51956 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC7.52□□□□□ -1.21
NEK3P51956 AC104820.1-201ENST00000624183 307 ntBASIC7.52□□□□□ -1.21
NEK3P51956 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
NEK3P51956 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
NEK3P51956 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.52□□□□□ -1.21
NEK3P51956 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
NEK3P51956 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
NEK3P51956 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
NEK3P51956 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC7.52□□□□□ -1.21
NEK3P51956 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.52□□□□□ -1.21
NEK3P51956 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
NEK3P51956 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NEK3P51956 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NEK3P51956 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
NEK3P51956 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NEK3P51956 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NEK3P51956 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NEK3P51956 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
NEK3P51956 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.51□□□□□ -1.21
NEK3P51956 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NEK3P51956 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NEK3P51956 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.51□□□□□ -1.21
NEK3P51956 RPL10P16-201ENST00000325000 645 ntBASIC7.51□□□□□ -1.21
NEK3P51956 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NEK3P51956 RNU1-38P-201ENST00000362817 144 ntBASIC7.51□□□□□ -1.21
NEK3P51956 ARMCX7P-201ENST00000372828 562 ntBASIC7.51□□□□□ -1.21
NEK3P51956 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NEK3P51956 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.51□□□□□ -1.21
NEK3P51956 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC7.51□□□□□ -1.21
NEK3P51956 AC006455.6-201ENST00000426192 893 ntBASIC7.51□□□□□ -1.21
NEK3P51956 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.51□□□□□ -1.21
NEK3P51956 CENPN-204ENST00000428963 971 ntTSL 2 BASIC7.51□□□□□ -1.21
NEK3P51956 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
NEK3P51956 AL645936.2-201ENST00000430565 928 ntBASIC7.51□□□□□ -1.21
NEK3P51956 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC7.51□□□□□ -1.21
NEK3P51956 AC018892.2-201ENST00000457656 693 ntBASIC7.51□□□□□ -1.21
NEK3P51956 AC015820.1-201ENST00000473882 321 ntBASIC7.51□□□□□ -1.21
NEK3P51956 AC008040.4-201ENST00000494834 768 ntBASIC7.51□□□□□ -1.21
NEK3P51956 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC7.51□□□□□ -1.21
NEK3P51956 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC7.51□□□□□ -1.21
NEK3P51956 AC055733.3-201ENST00000505214 523 ntBASIC7.51□□□□□ -1.21
NEK3P51956 AC010409.2-201ENST00000505780 478 ntBASIC7.51□□□□□ -1.21
NEK3P51956 GCSHP1-201ENST00000512554 484 ntBASIC7.51□□□□□ -1.21
NEK3P51956 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC7.51□□□□□ -1.21
NEK3P51956 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC7.51□□□□□ -1.21
NEK3P51956 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC7.51□□□□□ -1.21
NEK3P51956 KNTC1-206ENST00000534995 1065 ntTSL 2 BASIC7.51□□□□□ -1.21
NEK3P51956 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC7.51□□□□□ -1.21
NEK3P51956 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC7.51□□□□□ -1.21
NEK3P51956 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC7.51□□□□□ -1.21
NEK3P51956 AC138749.2-201ENST00000566048 167 ntBASIC7.51□□□□□ -1.21
NEK3P51956 RN7SL835P-201ENST00000579920 262 ntBASIC7.51□□□□□ -1.21
NEK3P51956 AC090774.2-201ENST00000584708 322 ntBASIC7.51□□□□□ -1.21
NEK3P51956 AC022387.2-201ENST00000604050 448 ntBASIC7.51□□□□□ -1.21
NEK3P51956 AC018690.1-201ENST00000608144 626 ntBASIC7.51□□□□□ -1.21
NEK3P51956 pRNA.9-201ENST00000618609 89 ntBASIC7.51□□□□□ -1.21
NEK3P51956 SNORA43.5-201ENST00000631270 138 ntBASIC7.51□□□□□ -1.21
NEK3P51956 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NEK3P51956 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC7.51□□□□□ -1.21
NEK3P51956 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NEK3P51956 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NEK3P51956 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
NEK3P51956 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC7.51□□□□□ -1.21
NEK3P51956 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
NEK3P51956 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
NEK3P51956 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
NEK3P51956 TRIM64EP-201ENST00000531233 1307 ntBASIC7.51□□□□□ -1.21
NEK3P51956 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
NEK3P51956 AC027279.1-201ENST00000568885 4284 ntBASIC7.5□□□□□ -1.21
NEK3P51956 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
NEK3P51956 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
NEK3P51956 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
NEK3P51956 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
NEK3P51956 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
NEK3P51956 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.5□□□□□ -1.21
NEK3P51956 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NEK3P51956 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC7.5□□□□□ -1.21
NEK3P51956 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NEK3P51956 RN7SKP36-201ENST00000363997 312 ntBASIC7.5□□□□□ -1.21
NEK3P51956 NXT2-204ENST00000372107 937 ntTSL 3 BASIC7.5□□□□□ -1.21
NEK3P51956 CNN3P1-201ENST00000401596 935 ntBASIC7.5□□□□□ -1.21
NEK3P51956 DHFRP5-201ENST00000406944 564 ntBASIC7.5□□□□□ -1.21
NEK3P51956 RNA5SP231-201ENST00000410496 138 ntBASIC7.5□□□□□ -1.21
NEK3P51956 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NEK3P51956 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC7.5□□□□□ -1.21
NEK3P51956 MORF4L1P5-201ENST00000433352 961 ntBASIC7.5□□□□□ -1.21
NEK3P51956 AC244505.2-201ENST00000435089 759 ntBASIC7.5□□□□□ -1.21
NEK3P51956 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC7.5□□□□□ -1.21
NEK3P51956 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC7.5□□□□□ -1.21
NEK3P51956 IGKV1OR2-2-201ENST00000451163 355 ntBASIC7.5□□□□□ -1.21
NEK3P51956 RN7SL791P-201ENST00000467868 295 ntBASIC7.5□□□□□ -1.21
NEK3P51956 RN7SL688P-201ENST00000471754 275 ntBASIC7.5□□□□□ -1.21
NEK3P51956 AC135999.1-201ENST00000478962 479 ntBASIC7.5□□□□□ -1.21
NEK3P51956 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC7.5□□□□□ -1.21
NEK3P51956 AC134698.1-201ENST00000511619 643 ntBASIC7.5□□□□□ -1.21
NEK3P51956 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC7.5□□□□□ -1.21
NEK3P51956 OR4A42P-201ENST00000531397 938 ntBASIC7.5□□□□□ -1.21
NEK3P51956 AC011611.6-201ENST00000547483 255 ntBASIC7.5□□□□□ -1.21
NEK3P51956 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms