Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC073488.9-201ENST00000631601 754 ntBASIC8.15□□□□□ -1.1
COL4A5P29400 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC8.15□□□□□ -1.1
COL4A5P29400 MTR-202ENST00000366577 10529 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
COL4A5P29400 MTAP-201ENST00000380172 6122 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
COL4A5P29400 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
COL4A5P29400 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
COL4A5P29400 TRIM51HP-202ENST00000530412 1823 ntBASIC8.15□□□□□ -1.11
COL4A5P29400 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC8.15□□□□□ -1.11
COL4A5P29400 FBN2-208ENST00000619499 10154 ntTSL 5 BASIC8.15□□□□□ -1.11
COL4A5P29400 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
COL4A5P29400 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
COL4A5P29400 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
COL4A5P29400 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC8.15□□□□□ -1.11
COL4A5P29400 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC8.15□□□□□ -1.11
COL4A5P29400 AC005702.3-201ENST00000585345 1447 ntBASIC8.15□□□□□ -1.11
COL4A5P29400 EEF1A1P21-201ENST00000512363 1344 ntBASIC8.15□□□□□ -1.11
COL4A5P29400 RNA5SP485-201ENST00000365053 119 ntBASIC8.14□□□□□ -1.11
COL4A5P29400 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
COL4A5P29400 AL512422.1-201ENST00000407033 553 ntBASIC8.14□□□□□ -1.11
COL4A5P29400 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
COL4A5P29400 CHEK2P5-201ENST00000423877 246 ntBASIC8.14□□□□□ -1.11
COL4A5P29400 OSTCP4-201ENST00000424397 449 ntBASIC8.14□□□□□ -1.11
COL4A5P29400 RPL5P6-201ENST00000425640 886 ntBASIC8.14□□□□□ -1.11
COL4A5P29400 AL354707.3-201ENST00000427308 331 ntBASIC8.14□□□□□ -1.11
COL4A5P29400 GTF3AP6-201ENST00000432585 986 ntBASIC8.14□□□□□ -1.11
COL4A5P29400 AC114755.4-201ENST00000439114 443 ntBASIC8.14□□□□□ -1.11
COL4A5P29400 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC8.14□□□□□ -1.11
COL4A5P29400 GM2AP2-201ENST00000491764 562 ntBASIC8.14□□□□□ -1.11
COL4A5P29400 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC8.14□□□□□ -1.11
COL4A5P29400 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC8.14□□□□□ -1.11
COL4A5P29400 MIR4701-201ENST00000583094 63 ntBASIC8.14□□□□□ -1.11
COL4A5P29400 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC8.14□□□□□ -1.11
COL4A5P29400 AL138895.2-201ENST00000603019 178 ntBASIC8.14□□□□□ -1.11
COL4A5P29400 AC067773.1-201ENST00000603284 1094 ntBASIC8.14□□□□□ -1.11
COL4A5P29400 AC018692.2-201ENST00000624130 348 ntBASIC8.14□□□□□ -1.11
COL4A5P29400 AC073488.6-201ENST00000632293 754 ntBASIC8.14□□□□□ -1.11
COL4A5P29400 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC8.14□□□□□ -1.11
COL4A5P29400 AP000542.3-201ENST00000623391 6114 ntBASIC8.14□□□□□ -1.11
COL4A5P29400 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
COL4A5P29400 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
COL4A5P29400 FAM107A-201ENST00000360997 3367 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
COL4A5P29400 COL28A1-201ENST00000399429 4277 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
COL4A5P29400 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
COL4A5P29400 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC8.14□□□□□ -1.11
COL4A5P29400 AKAP17BP-201ENST00000431706 2719 ntBASIC8.14□□□□□ -1.11
COL4A5P29400 ZNF610-207ENST00000601151 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
COL4A5P29400 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC8.14□□□□□ -1.11
COL4A5P29400 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
COL4A5P29400 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
COL4A5P29400 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC8.14□□□□□ -1.11
COL4A5P29400 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
COL4A5P29400 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
COL4A5P29400 CEP152-202ENST00000380950 5635 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
COL4A5P29400 SLMAP-203ENST00000383718 6749 ntTSL 2 BASIC8.14□□□□□ -1.11
COL4A5P29400 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
COL4A5P29400 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
COL4A5P29400 AC066692.1-201ENST00000421721 457 ntBASIC8.14□□□□□ -1.11
COL4A5P29400 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC8.14□□□□□ -1.11
COL4A5P29400 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
COL4A5P29400 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC8.14□□□□□ -1.11
COL4A5P29400 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC8.14□□□□□ -1.11
COL4A5P29400 RPL7AP23-201ENST00000482625 776 ntBASIC8.14□□□□□ -1.11
COL4A5P29400 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
COL4A5P29400 RPL24-206ENST00000495401 478 ntTSL 2 BASIC8.14□□□□□ -1.11
COL4A5P29400 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
COL4A5P29400 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC8.14□□□□□ -1.11
COL4A5P29400 TRIM77BP-201ENST00000524985 1119 ntBASIC8.14□□□□□ -1.11
COL4A5P29400 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC8.14□□□□□ -1.11
COL4A5P29400 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC8.14□□□□□ -1.11
COL4A5P29400 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC8.14□□□□□ -1.11
COL4A5P29400 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC8.14□□□□□ -1.11
COL4A5P29400 RPSAP75-201ENST00000605848 301 ntBASIC8.14□□□□□ -1.11
COL4A5P29400 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC8.14□□□□□ -1.11
COL4A5P29400 AC093635.1-201ENST00000609028 555 ntBASIC8.14□□□□□ -1.11
COL4A5P29400 DAZ2-207ENST00000382449 3791 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
COL4A5P29400 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
COL4A5P29400 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
COL4A5P29400 AC016582.1-202ENST00000636341 2982 ntBASIC8.14□□□□□ -1.11
COL4A5P29400 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC8.14□□□□□ -1.11
COL4A5P29400 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
COL4A5P29400 CDY7P-201ENST00000429883 1604 ntBASIC8.13□□□□□ -1.11
COL4A5P29400 CTNNA2-209ENST00000466387 4349 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
COL4A5P29400 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
COL4A5P29400 AC125603.4-201ENST00000621942 2699 ntBASIC8.13□□□□□ -1.11
COL4A5P29400 TRPM3-214ENST00000396292 4740 ntAPPRIS P4 TSL 5 BASIC8.13□□□□□ -1.11
COL4A5P29400 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
COL4A5P29400 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
COL4A5P29400 MARF1-211ENST00000551742 5900 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
COL4A5P29400 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC8.13□□□□□ -1.11
COL4A5P29400 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC8.13□□□□□ -1.11
COL4A5P29400 SNHG14-210ENST00000546682 8842 ntTSL 5 BASIC8.13□□□□□ -1.11
COL4A5P29400 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC8.13□□□□□ -1.11
COL4A5P29400 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
COL4A5P29400 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
COL4A5P29400 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
COL4A5P29400 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
COL4A5P29400 LCN1P2-201ENST00000372030 223 ntBASIC8.13□□□□□ -1.11
COL4A5P29400 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC8.13□□□□□ -1.11
COL4A5P29400 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
COL4A5P29400 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms