Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
ERCC2P18074 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ERCC2P18074 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ERCC2P18074 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.25□□□□□ -1.25
ERCC2P18074 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.25□□□□□ -1.25
ERCC2P18074 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
ERCC2P18074 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ERCC2P18074 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
ERCC2P18074 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ERCC2P18074 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
ERCC2P18074 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.24□□□□□ -1.25
ERCC2P18074 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC7.24□□□□□ -1.25
ERCC2P18074 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ERCC2P18074 AC089998.1-201ENST00000548575 3141 ntBASIC7.24□□□□□ -1.25
ERCC2P18074 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ERCC2P18074 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
ERCC2P18074 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ERCC2P18074 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.24□□□□□ -1.25
ERCC2P18074 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.24□□□□□ -1.25
ERCC2P18074 ENO1P4-201ENST00000416471 1785 ntBASIC7.24□□□□□ -1.25
ERCC2P18074 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ERCC2P18074 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
ERCC2P18074 AKR1C4-201ENST00000263126 1192 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ERCC2P18074 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
ERCC2P18074 RN7SKP55-201ENST00000364888 307 ntBASIC7.24□□□□□ -1.25
ERCC2P18074 RN7SKP30-201ENST00000411373 334 ntBASIC7.24□□□□□ -1.25
ERCC2P18074 AL773545.3-201ENST00000414297 706 ntBASIC7.24□□□□□ -1.25
ERCC2P18074 NRIR-202ENST00000414795 506 ntTSL 3 BASIC7.24□□□□□ -1.25
ERCC2P18074 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
ERCC2P18074 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
ERCC2P18074 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC7.24□□□□□ -1.25
ERCC2P18074 LSM3P3-201ENST00000436601 306 ntBASIC7.24□□□□□ -1.25
ERCC2P18074 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC7.24□□□□□ -1.25
ERCC2P18074 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC7.24□□□□□ -1.25
ERCC2P18074 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.24□□□□□ -1.25
ERCC2P18074 GAPDHP53-201ENST00000458397 924 ntBASIC7.24□□□□□ -1.25
ERCC2P18074 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.24□□□□□ -1.25
ERCC2P18074 AC135721.2-201ENST00000464237 300 ntBASIC7.24□□□□□ -1.25
ERCC2P18074 RPSAP48-201ENST00000466509 889 ntBASIC7.24□□□□□ -1.25
ERCC2P18074 CBX5P1-201ENST00000468470 561 ntBASIC7.24□□□□□ -1.25
ERCC2P18074 AC096743.1-201ENST00000485172 319 ntBASIC7.24□□□□□ -1.25
ERCC2P18074 TECRP2-201ENST00000503270 928 ntBASIC7.24□□□□□ -1.25
ERCC2P18074 SCARNA18.2-201ENST00000516882 84 ntBASIC7.24□□□□□ -1.25
ERCC2P18074 AC100854.1-201ENST00000520351 341 ntBASIC7.24□□□□□ -1.25
ERCC2P18074 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC7.24□□□□□ -1.25
ERCC2P18074 AP001994.1-201ENST00000527539 826 ntBASIC7.24□□□□□ -1.25
ERCC2P18074 AP001646.2-201ENST00000528645 1156 ntBASIC7.24□□□□□ -1.25
ERCC2P18074 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC7.24□□□□□ -1.25
ERCC2P18074 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC7.24□□□□□ -1.25
ERCC2P18074 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
ERCC2P18074 AL161420.1-201ENST00000619393 264 ntBASIC7.24□□□□□ -1.25
ERCC2P18074 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC7.24□□□□□ -1.25
ERCC2P18074 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC7.24□□□□□ -1.25
ERCC2P18074 AC011471.4-201ENST00000638271 216 ntBASIC7.24□□□□□ -1.25
ERCC2P18074 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.24□□□□□ -1.25
ERCC2P18074 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
ERCC2P18074 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.24□□□□□ -1.25
ERCC2P18074 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
ERCC2P18074 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
ERCC2P18074 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ERCC2P18074 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.24□□□□□ -1.25
ERCC2P18074 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
ERCC2P18074 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
ERCC2P18074 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ERCC2P18074 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ERCC2P18074 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
ERCC2P18074 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
ERCC2P18074 DDX43P1-201ENST00000510713 1763 ntBASIC7.23□□□□□ -1.25
ERCC2P18074 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.23□□□□□ -1.25
ERCC2P18074 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
ERCC2P18074 MARK2P4-201ENST00000503381 2380 ntBASIC7.23□□□□□ -1.25
ERCC2P18074 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
ERCC2P18074 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
ERCC2P18074 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
ERCC2P18074 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.23□□□□□ -1.25
ERCC2P18074 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
ERCC2P18074 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
ERCC2P18074 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
ERCC2P18074 RNA5SP114-201ENST00000363780 113 ntBASIC7.23□□□□□ -1.25
ERCC2P18074 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ERCC2P18074 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC7.23□□□□□ -1.25
ERCC2P18074 SOD1P1-201ENST00000407803 440 ntBASIC7.23□□□□□ -1.25
ERCC2P18074 SNORA11D-201ENST00000408548 128 ntBASIC7.23□□□□□ -1.25
ERCC2P18074 SNORA11E-201ENST00000408778 128 ntBASIC7.23□□□□□ -1.25
ERCC2P18074 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.23□□□□□ -1.25
ERCC2P18074 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ERCC2P18074 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC7.23□□□□□ -1.25
ERCC2P18074 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC7.23□□□□□ -1.25
ERCC2P18074 BX005266.3-201ENST00000443013 1075 ntBASIC7.23□□□□□ -1.25
ERCC2P18074 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.23□□□□□ -1.25
ERCC2P18074 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC7.23□□□□□ -1.25
ERCC2P18074 RPL34P34-201ENST00000465389 354 ntBASIC7.23□□□□□ -1.25
ERCC2P18074 AP000805.1-201ENST00000471604 784 ntBASIC7.23□□□□□ -1.25
ERCC2P18074 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
ERCC2P18074 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC7.23□□□□□ -1.25
ERCC2P18074 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC7.23□□□□□ -1.25
ERCC2P18074 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.23□□□□□ -1.25
ERCC2P18074 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ERCC2P18074 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC7.23□□□□□ -1.25
ERCC2P18074 EIF4A3P1-201ENST00000578499 647 ntBASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms