Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 LRRC37A6P-202ENST00000448648 5444 ntBASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 AC087203.2-201ENST00000526502 1587 ntBASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 OR8D4-202ENST00000641687 2904 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 SSXP3-201ENST00000442971 1300 ntBASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 RPL12P1-201ENST00000374520 498 ntBASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 MIR431-201ENST00000385266 114 ntBASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 MTCO1P21-201ENST00000416634 589 ntBASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 AL356320.2-201ENST00000417263 507 ntBASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 AC244033.1-201ENST00000426826 870 ntBASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 TRBV26OR9-2-201ENST00000432077 293 ntBASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 AL138878.2-201ENST00000440581 1241 ntBASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 RN7SL635P-201ENST00000492123 296 ntBASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 MRPL49P1-201ENST00000505951 535 ntBASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 RNA5SP75-201ENST00000516841 111 ntBASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 AC103855.4-201ENST00000533158 265 ntBASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 GLRXP2-201ENST00000555594 321 ntBASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 AC090607.2-201ENST00000560331 695 ntBASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 AC106730.2-201ENST00000566641 540 ntBASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 AC103987.3-201ENST00000582071 292 ntBASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 AC024451.4-201ENST00000602578 752 ntBASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 AL109653.1-201ENST00000603091 248 ntBASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 RPS28P1-201ENST00000604589 187 ntBASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 AC245297.2-201ENST00000610119 565 ntBASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 AC123767.1-202ENST00000620407 817 ntBASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 AP000676.3-201ENST00000623299 569 ntBASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 SERPINA9-202ENST00000337425 1755 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 CDY5P-201ENST00000411487 1580 ntBASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 CDY9P-201ENST00000451397 1580 ntBASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 MTND4P8-201ENST00000514997 1362 ntBASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 Z97832.2-201ENST00000605896 4261 ntBASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 Z99129.4-201ENST00000624649 2435 ntBASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 IST1-208ENST00000535424 4082 ntTSL 5 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 Y_RNA.201-201ENST00000364052 96 ntBASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 NRIR-201ENST00000366140 799 ntTSL 3 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC8.09□□□□□ -1.11
SHKBP1Q8TBC3 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms