Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.53□□□□□ -1.2
NEK3P51956 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
NEK3P51956 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.53□□□□□ -1.2
NEK3P51956 AC123769.2-201ENST00000624332 5984 ntBASIC7.53□□□□□ -1.2
NEK3P51956 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NEK3P51956 RBMX2P2-201ENST00000257020 946 ntBASIC7.53□□□□□ -1.2
NEK3P51956 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC7.53□□□□□ -1.2
NEK3P51956 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
NEK3P51956 MIR575-201ENST00000385013 94 ntBASIC7.53□□□□□ -1.2
NEK3P51956 MIR498-201ENST00000385134 124 ntBASIC7.53□□□□□ -1.2
NEK3P51956 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
NEK3P51956 MTND3P20-201ENST00000407663 186 ntBASIC7.53□□□□□ -1.2
NEK3P51956 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC7.53□□□□□ -1.2
NEK3P51956 FTOP1-201ENST00000419363 861 ntBASIC7.53□□□□□ -1.2
NEK3P51956 RPL12P43-201ENST00000420608 499 ntBASIC7.53□□□□□ -1.2
NEK3P51956 RBM22P7-201ENST00000421321 280 ntBASIC7.53□□□□□ -1.2
NEK3P51956 OR5P4P-201ENST00000424698 917 ntBASIC7.53□□□□□ -1.2
NEK3P51956 AC105052.2-201ENST00000434317 794 ntBASIC7.53□□□□□ -1.2
NEK3P51956 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
NEK3P51956 NDUFA5P8-201ENST00000449019 346 ntBASIC7.53□□□□□ -1.2
NEK3P51956 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC7.53□□□□□ -1.2
NEK3P51956 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC7.53□□□□□ -1.2
NEK3P51956 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC7.53□□□□□ -1.2
NEK3P51956 IGLVI-42-201ENST00000522485 381 ntBASIC7.53□□□□□ -1.2
NEK3P51956 SAA3P-201ENST00000533267 365 ntBASIC7.53□□□□□ -1.2
NEK3P51956 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC7.53□□□□□ -1.2
NEK3P51956 AC068631.3-201ENST00000538831 225 ntBASIC7.53□□□□□ -1.2
NEK3P51956 AL132640.2-202ENST00000559732 614 ntBASIC7.53□□□□□ -1.2
NEK3P51956 UBE2CP4-201ENST00000561405 535 ntBASIC7.53□□□□□ -1.2
NEK3P51956 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC7.53□□□□□ -1.2
NEK3P51956 AC010547.7-201ENST00000570323 333 ntBASIC7.53□□□□□ -1.2
NEK3P51956 EIF1-207ENST00000591776 797 ntTSL 4 BASIC7.53□□□□□ -1.2
NEK3P51956 RPS11-203ENST00000596873 583 ntTSL 2 BASIC7.53□□□□□ -1.2
NEK3P51956 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC7.53□□□□□ -1.2
NEK3P51956 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC7.53□□□□□ -1.2
NEK3P51956 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.53□□□□□ -1.2
NEK3P51956 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC7.53□□□□□ -1.2
NEK3P51956 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NEK3P51956 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC7.53□□□□□ -1.2
NEK3P51956 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
NEK3P51956 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.53□□□□□ -1.2
NEK3P51956 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
NEK3P51956 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
NEK3P51956 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
NEK3P51956 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
NEK3P51956 PAH-201ENST00000307000 2466 ntTSL 5 BASIC7.53□□□□□ -1.2
NEK3P51956 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.53□□□□□ -1.2
NEK3P51956 AC016251.2-201ENST00000623393 3089 ntBASIC7.53□□□□□ -1.2
NEK3P51956 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
NEK3P51956 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
NEK3P51956 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
NEK3P51956 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.2
NEK3P51956 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
NEK3P51956 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.52□□□□□ -1.2
NEK3P51956 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
NEK3P51956 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC7.52□□□□□ -1.21
NEK3P51956 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
NEK3P51956 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
NEK3P51956 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
NEK3P51956 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
NEK3P51956 CUL4AP1-201ENST00000514750 1863 ntBASIC7.52□□□□□ -1.21
NEK3P51956 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
NEK3P51956 EEF1A1P22-201ENST00000559385 1380 ntBASIC7.52□□□□□ -1.21
NEK3P51956 AL078621.1-201ENST00000272567 768 ntBASIC7.52□□□□□ -1.21
NEK3P51956 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
NEK3P51956 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
NEK3P51956 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
NEK3P51956 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
NEK3P51956 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
NEK3P51956 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
NEK3P51956 RNA5SP396-201ENST00000364834 120 ntBASIC7.52□□□□□ -1.21
NEK3P51956 TMEM213-201ENST00000397602 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
NEK3P51956 RN7SKP225-201ENST00000410405 352 ntBASIC7.52□□□□□ -1.21
NEK3P51956 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC7.52□□□□□ -1.21
NEK3P51956 LINC01715-201ENST00000420776 624 ntTSL 2 BASIC7.52□□□□□ -1.21
NEK3P51956 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
NEK3P51956 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC7.52□□□□□ -1.21
NEK3P51956 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC7.52□□□□□ -1.21
NEK3P51956 LIN28AP2-201ENST00000445283 458 ntBASIC7.52□□□□□ -1.21
NEK3P51956 DEFA11P-201ENST00000446470 261 ntBASIC7.52□□□□□ -1.21
NEK3P51956 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
NEK3P51956 AL356390.1-201ENST00000455684 397 ntBASIC7.52□□□□□ -1.21
NEK3P51956 VN1R6P-201ENST00000458417 907 ntBASIC7.52□□□□□ -1.21
NEK3P51956 NDUFB4P1-201ENST00000462398 381 ntBASIC7.52□□□□□ -1.21
NEK3P51956 AC008620.1-201ENST00000468453 592 ntBASIC7.52□□□□□ -1.21
NEK3P51956 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC7.52□□□□□ -1.21
NEK3P51956 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC7.52□□□□□ -1.21
NEK3P51956 NPY6R-201ENST00000503807 1112 ntBASIC7.52□□□□□ -1.21
NEK3P51956 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC7.52□□□□□ -1.21
NEK3P51956 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
NEK3P51956 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC7.52□□□□□ -1.21
NEK3P51956 KCTD9P6-201ENST00000522306 950 ntBASIC7.52□□□□□ -1.21
NEK3P51956 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.52□□□□□ -1.21
NEK3P51956 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC7.52□□□□□ -1.21
NEK3P51956 MED31-202ENST00000574128 619 ntTSL 3 BASIC7.52□□□□□ -1.21
NEK3P51956 AC004232.2-201ENST00000574245 821 ntBASIC7.52□□□□□ -1.21
NEK3P51956 AP006587.6-201ENST00000582128 1091 ntBASIC7.52□□□□□ -1.21
NEK3P51956 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.52□□□□□ -1.21
NEK3P51956 AL021368.1-201ENST00000607490 540 ntBASIC7.52□□□□□ -1.21
NEK3P51956 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms