Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC7.04□□□□□ -1.28
CHD7Q9P2D1 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC7.04□□□□□ -1.28
CHD7Q9P2D1 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.04□□□□□ -1.28
CHD7Q9P2D1 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.04□□□□□ -1.28
CHD7Q9P2D1 MIR6730-201ENST00000622213 67 ntBASIC7.04□□□□□ -1.28
CHD7Q9P2D1 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CHD7Q9P2D1 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CHD7Q9P2D1 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CHD7Q9P2D1 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CHD7Q9P2D1 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.04□□□□□ -1.28
CHD7Q9P2D1 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC7.04□□□□□ -1.28
CHD7Q9P2D1 PKNOX1-203ENST00000432907 5180 ntTSL 2 BASIC7.04□□□□□ -1.28
CHD7Q9P2D1 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 TNIK-201ENST00000284483 4059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 AL929472.1-201ENST00000417484 429 ntBASIC7.03□□□□□ -1.28
CHD7Q9P2D1 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 RBMY3AP-201ENST00000449381 1145 ntBASIC7.03□□□□□ -1.28
CHD7Q9P2D1 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 RN7SL799P-201ENST00000475891 298 ntBASIC7.03□□□□□ -1.28
CHD7Q9P2D1 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 AC063943.2-201ENST00000495697 534 ntBASIC7.03□□□□□ -1.28
CHD7Q9P2D1 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 AC016769.4-201ENST00000616893 535 ntBASIC7.03□□□□□ -1.28
CHD7Q9P2D1 AC126175.1-201ENST00000617041 758 ntBASIC7.03□□□□□ -1.28
CHD7Q9P2D1 AC069234.4-201ENST00000621276 412 ntBASIC7.03□□□□□ -1.28
CHD7Q9P2D1 AC073488.3-201ENST00000631611 778 ntBASIC7.03□□□□□ -1.28
CHD7Q9P2D1 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 RASSF2-201ENST00000379376 5282 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 RGS6-201ENST00000343854 5342 ntTSL 5 BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 CPT1A-201ENST00000265641 5232 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 RNF19BPY-201ENST00000458209 1550 ntBASIC7.03□□□□□ -1.28
CHD7Q9P2D1 TMSB4XP4-201ENST00000323496 618 ntBASIC7.03□□□□□ -1.28
CHD7Q9P2D1 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 RPL6P30-201ENST00000443382 862 ntBASIC7.03□□□□□ -1.28
CHD7Q9P2D1 RPL31P15-201ENST00000449770 338 ntBASIC7.03□□□□□ -1.28
CHD7Q9P2D1 UBFD1P1-201ENST00000473259 814 ntBASIC7.03□□□□□ -1.28
CHD7Q9P2D1 AC108103.1-201ENST00000511286 446 ntBASIC7.03□□□□□ -1.28
CHD7Q9P2D1 RN7SKP238-201ENST00000516483 249 ntBASIC7.03□□□□□ -1.28
CHD7Q9P2D1 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 AP006245.2-201ENST00000522004 300 ntBASIC7.03□□□□□ -1.28
CHD7Q9P2D1 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 SPIN3-211ENST00000638712 4286 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 NCAM1-221ENST00000615112 5967 ntAPPRIS P5 TSL 5 BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 MAP4-207ENST00000426837 8920 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 PCDHA9-201ENST00000378122 6900 ntBASIC7.03□□□□□ -1.28
CHD7Q9P2D1 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 SLC38A2-201ENST00000256689 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 VCPIP1-201ENST00000310421 9942 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CHD7Q9P2D1 AC093225.1-201ENST00000506867 1408 ntBASIC7.02□□□□□ -1.28
CHD7Q9P2D1 RARSP1-201ENST00000542842 1418 ntBASIC7.02□□□□□ -1.28
CHD7Q9P2D1 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.28
CHD7Q9P2D1 AC073065.1-201ENST00000411678 2866 ntBASIC7.02□□□□□ -1.28
CHD7Q9P2D1 C1RL-AS1-205ENST00000541775 5272 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
CHD7Q9P2D1 SNORA68-201ENST00000384437 133 ntBASIC7.02□□□□□ -1.28
CHD7Q9P2D1 NIPA2P1-201ENST00000426223 976 ntBASIC7.02□□□□□ -1.28
CHD7Q9P2D1 ATP6V1E1P1-201ENST00000439215 681 ntBASIC7.02□□□□□ -1.28
CHD7Q9P2D1 AC008410.1-201ENST00000483777 339 ntBASIC7.02□□□□□ -1.28
CHD7Q9P2D1 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.02□□□□□ -1.28
CHD7Q9P2D1 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.02□□□□□ -1.28
CHD7Q9P2D1 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.02□□□□□ -1.28
CHD7Q9P2D1 MIR4700-201ENST00000578311 74 ntBASIC7.02□□□□□ -1.28
CHD7Q9P2D1 SNORD95-201ENST00000579879 68 ntBASIC7.02□□□□□ -1.28
CHD7Q9P2D1 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.02□□□□□ -1.28
CHD7Q9P2D1 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 GRIK3-201ENST00000373091 9101 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 FLNB-201ENST00000295956 9463 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 APC2-203ENST00000535453 11656 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CHD7Q9P2D1 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms