Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AC110769.3-201ENST00000624567 1173 ntBASIC6.59□□□□□ -1.35
CCNB1IP1Q9NPC3 SNORA43.5-201ENST00000631270 138 ntBASIC6.59□□□□□ -1.35
CCNB1IP1Q9NPC3 CDY5P-201ENST00000411487 1580 ntBASIC6.59□□□□□ -1.35
CCNB1IP1Q9NPC3 CDY9P-201ENST00000451397 1580 ntBASIC6.59□□□□□ -1.35
CCNB1IP1Q9NPC3 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCNB1IP1Q9NPC3 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCNB1IP1Q9NPC3 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCNB1IP1Q9NPC3 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.59□□□□□ -1.35
CCNB1IP1Q9NPC3 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.59□□□□□ -1.35
CCNB1IP1Q9NPC3 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.59□□□□□ -1.35
CCNB1IP1Q9NPC3 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CCNB1IP1Q9NPC3 AC009779.8-201ENST00000641684 4384 ntBASIC6.59□□□□□ -1.36
CCNB1IP1Q9NPC3 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CCNB1IP1Q9NPC3 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CCNB1IP1Q9NPC3 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
CCNB1IP1Q9NPC3 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 AC083806.2-201ENST00000617795 2685 ntBASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 CASP4-201ENST00000393150 1340 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 RNA5SP333-201ENST00000363466 118 ntBASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 RNA5SP334-201ENST00000364825 118 ntBASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 RPL17P17-201ENST00000419491 557 ntBASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 AL593856.1-201ENST00000419949 805 ntBASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 GAPDHP46-201ENST00000424043 994 ntBASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 HBBP1-201ENST00000433329 439 ntBASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 OR3B1P-201ENST00000437536 893 ntBASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 AC108039.2-201ENST00000440214 359 ntBASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 RPS2P25-201ENST00000467247 580 ntBASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 ST13P6-201ENST00000522430 1102 ntBASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 RN7SL786P-201ENST00000579130 298 ntBASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 RN7SL760P-201ENST00000607344 270 ntBASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 AC023310.4-201ENST00000613130 650 ntBASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CCNB1IP1Q9NPC3 OR52B5P-204ENST00000641744 3467 ntBASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 DIO2-AS1-201ENST00000553979 1597 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 AL035563.1-201ENST00000609087 1539 ntBASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 SNORA2C-201ENST00000408564 137 ntBASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 EEF1GP7-201ENST00000422983 703 ntBASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 PSMC1P2-201ENST00000423961 1204 ntBASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 SNX18P3-201ENST00000424993 835 ntBASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 AC000362.1-201ENST00000433725 425 ntBASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 CYP2C56P-201ENST00000440076 291 ntBASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 LIN28AP2-201ENST00000445283 458 ntBASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 RPL4P2-201ENST00000447259 1282 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms