Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC139713.2-210ENST00000641741 992 ntBASIC8.12□□□□□ -1.11
SHKBP1Q8TBC3 DIO2-AS1-201ENST00000553979 1597 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SHKBP1Q8TBC3 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SHKBP1Q8TBC3 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SHKBP1Q8TBC3 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC8.12□□□□□ -1.11
SHKBP1Q8TBC3 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SHKBP1Q8TBC3 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SHKBP1Q8TBC3 CTAGE3P-201ENST00000454280 2404 ntBASIC8.12□□□□□ -1.11
SHKBP1Q8TBC3 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC8.12□□□□□ -1.11
SHKBP1Q8TBC3 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC8.12□□□□□ -1.11
SHKBP1Q8TBC3 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SHKBP1Q8TBC3 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SHKBP1Q8TBC3 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SHKBP1Q8TBC3 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SHKBP1Q8TBC3 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SHKBP1Q8TBC3 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC8.12□□□□□ -1.11
SHKBP1Q8TBC3 EEF1A1P4-201ENST00000359165 1405 ntBASIC8.12□□□□□ -1.11
SHKBP1Q8TBC3 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SHKBP1Q8TBC3 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 AC009166.2-201ENST00000624410 2833 ntBASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 RPL10P16-201ENST00000325000 645 ntBASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 RNA5SP355-201ENST00000365317 135 ntBASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 H2AFZP3-201ENST00000394213 387 ntBASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 TERF1P4-201ENST00000399580 1115 ntBASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 AL445238.1-204ENST00000400311 463 ntBASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 YWHAZP3-201ENST00000415292 738 ntBASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 SEPT2P1-201ENST00000419651 180 ntBASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 GAPDHP55-201ENST00000423136 803 ntBASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 CENPN-204ENST00000428963 971 ntTSL 2 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 MTCYBP39-201ENST00000437562 491 ntBASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 EXOSC3P1-201ENST00000448649 500 ntBASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 NPSR1-208ENST00000465305 814 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 AC106760.2-201ENST00000504159 619 ntBASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 CCNHP1-201ENST00000513311 678 ntBASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 RNA5SP101-201ENST00000517036 108 ntBASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 AC100823.2-201ENST00000518337 699 ntBASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 SKA2-203ENST00000578105 689 ntTSL 2 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 AC005262.1-201ENST00000588562 362 ntBASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 AC060766.6-201ENST00000589099 394 ntTSL 3 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 AL035417.2-201ENST00000603887 796 ntBASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 DIMT1P1-201ENST00000603970 763 ntBASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 AL109936.2-201ENST00000605350 650 ntBASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 AC023310.4-201ENST00000613130 650 ntBASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 AC068880.4-201ENST00000623082 495 ntBASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 AC098679.5-201ENST00000624394 571 ntBASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 MAPK10-333ENST00000641607 2481 ntBASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 GTF2H1-210ENST00000530496 1700 ntTSL 2 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 ZNF611-203ENST00000540744 4417 ntAPPRIS P1 TSL 4 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 NUMB-211ENST00000554521 1406 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 AC133552.3-201ENST00000572236 1869 ntBASIC8.11□□□□□ -1.11
SHKBP1Q8TBC3 GUCY2GP-201ENST00000479705 3222 ntBASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 CSF2RA-206ENST00000381529 1816 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
SHKBP1Q8TBC3 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms