Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 AL080312.1-201ENST00000256654 824 ntBASIC7.48□□□□□ -1.21
LMO3Q8TAP4 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 AL359715.1-201ENST00000404330 555 ntBASIC7.48□□□□□ -1.21
LMO3Q8TAP4 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.48□□□□□ -1.21
LMO3Q8TAP4 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 AC126615.1-201ENST00000470084 630 ntBASIC7.48□□□□□ -1.21
LMO3Q8TAP4 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 AC098799.1-201ENST00000504752 800 ntBASIC7.48□□□□□ -1.21
LMO3Q8TAP4 SCARNA18.2-201ENST00000516882 84 ntBASIC7.48□□□□□ -1.21
LMO3Q8TAP4 OR9L1P-201ENST00000529493 933 ntBASIC7.48□□□□□ -1.21
LMO3Q8TAP4 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 AC008937.3-201ENST00000606813 1700 ntBASIC7.48□□□□□ -1.21
LMO3Q8TAP4 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 CAST-222ENST00000508579 1758 ntTSL 2 BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 AL353898.3-201ENST00000624679 1755 ntBASIC7.48□□□□□ -1.21
LMO3Q8TAP4 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 QRSL1P3-201ENST00000552666 1316 ntBASIC7.48□□□□□ -1.21
LMO3Q8TAP4 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.48□□□□□ -1.21
LMO3Q8TAP4 AC102941.1-201ENST00000567616 1537 ntBASIC7.47□□□□□ -1.21
LMO3Q8TAP4 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 AC023886.2-201ENST00000321285 411 ntBASIC7.47□□□□□ -1.21
LMO3Q8TAP4 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 RNA5SP53-201ENST00000391299 120 ntBASIC7.47□□□□□ -1.21
LMO3Q8TAP4 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 NRIR-202ENST00000414795 506 ntTSL 3 BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 AC114402.2-201ENST00000432760 643 ntBASIC7.47□□□□□ -1.21
LMO3Q8TAP4 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 RN7SL705P-201ENST00000481678 294 ntBASIC7.47□□□□□ -1.21
LMO3Q8TAP4 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 AC111000.1-201ENST00000514545 713 ntBASIC7.47□□□□□ -1.21
LMO3Q8TAP4 AP006587.5-201ENST00000532033 739 ntBASIC7.47□□□□□ -1.21
LMO3Q8TAP4 SSU72P6-201ENST00000532644 488 ntBASIC7.47□□□□□ -1.21
LMO3Q8TAP4 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 AL121782.1-201ENST00000611242 413 ntBASIC7.47□□□□□ -1.21
LMO3Q8TAP4 AC026951.2-201ENST00000613847 241 ntBASIC7.47□□□□□ -1.21
LMO3Q8TAP4 AC131009.3-201ENST00000621809 287 ntBASIC7.47□□□□□ -1.21
LMO3Q8TAP4 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 PCAT18-201ENST00000579458 2598 ntTSL 2 BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LMO3Q8TAP4 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
LMO3Q8TAP4 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.46□□□□□ -1.21
LMO3Q8TAP4 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
LMO3Q8TAP4 ZNF710-AS1-202ENST00000620791 2133 ntBASIC7.46□□□□□ -1.21
LMO3Q8TAP4 ATP5BP1-201ENST00000411980 1574 ntBASIC7.46□□□□□ -1.21
LMO3Q8TAP4 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
LMO3Q8TAP4 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
LMO3Q8TAP4 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
LMO3Q8TAP4 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms