Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 PMS2P11-201ENST00000451831 574 ntBASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 RN7SL685P-201ENST00000476271 298 ntBASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 RN7SL338P-201ENST00000481467 293 ntBASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 AC095057.1-201ENST00000507583 168 ntBASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 MIR3135A-201ENST00000578460 77 ntBASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 RN7SL664P-201ENST00000584239 305 ntBASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 AL683813.2-201ENST00000605245 502 ntBASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.54□□□□□ -1.2
CCDC50Q8IVM0 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 AC007406.5-201ENST00000570140 3170 ntBASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 U3.1-201ENST00000362500 215 ntBASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 CES5AP1-201ENST00000400418 859 ntBASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 RN7SKP232-201ENST00000410170 290 ntBASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 PHB2P1-201ENST00000434943 890 ntBASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 PYM1-204ENST00000454792 884 ntTSL 2 BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 BZW1P1-201ENST00000454901 1240 ntBASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 PSPC1P2-201ENST00000455130 225 ntBASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 AC013429.1-201ENST00000456604 422 ntBASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 RPL34P22-201ENST00000468193 318 ntBASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 RN7SL58P-201ENST00000473445 294 ntBASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 AC123768.2-201ENST00000500941 732 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 PABPC1P1-201ENST00000506347 591 ntBASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 OR7E1P-201ENST00000533891 958 ntBASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 AC136944.5-201ENST00000573021 151 ntBASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 OR7E94P-202ENST00000601375 790 ntBASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 AC023513.1-201ENST00000604396 691 ntBASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 AL109936.2-201ENST00000605350 650 ntBASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 AL596275.2-203ENST00000641951 371 ntBASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 AL359195.2-201ENST00000623657 4412 ntBASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC50Q8IVM0 AC106872.6-201ENST00000514228 1346 ntBASIC7.52□□□□□ -1.2
CCDC50Q8IVM0 AC061975.5-201ENST00000584928 1441 ntBASIC7.52□□□□□ -1.2
CCDC50Q8IVM0 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.52□□□□□ -1.2
CCDC50Q8IVM0 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
CCDC50Q8IVM0 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 ZNF658B-201ENST00000602828 3408 ntBASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 RNA5SP260-201ENST00000363849 111 ntBASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 SNORD15A-201ENST00000384214 148 ntBASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 MED15P9-201ENST00000424716 533 ntBASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 AC092066.1-201ENST00000425131 317 ntBASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 AL121916.1-201ENST00000429405 308 ntBASIC7.52□□□□□ -1.21
CCDC50Q8IVM0 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 409.9 ms