Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 HTR1DP1-201ENST00000616500 888 ntBASIC8.37□□□□□ -1.07
HLA-DOAP06340 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC8.37□□□□□ -1.07
HLA-DOAP06340 MIR6813-201ENST00000621638 56 ntBASIC8.37□□□□□ -1.07
HLA-DOAP06340 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
HLA-DOAP06340 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
HLA-DOAP06340 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
HLA-DOAP06340 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
HLA-DOAP06340 AC079248.1-201ENST00000427568 1546 ntBASIC8.37□□□□□ -1.07
HLA-DOAP06340 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
HLA-DOAP06340 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC8.37□□□□□ -1.07
HLA-DOAP06340 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC8.37□□□□□ -1.07
HLA-DOAP06340 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
HLA-DOAP06340 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
HLA-DOAP06340 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
HLA-DOAP06340 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
HLA-DOAP06340 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC8.37□□□□□ -1.07
HLA-DOAP06340 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC8.37□□□□□ -1.07
HLA-DOAP06340 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC8.37□□□□□ -1.07
HLA-DOAP06340 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
HLA-DOAP06340 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
HLA-DOAP06340 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
HLA-DOAP06340 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
HLA-DOAP06340 PHF2P2-202ENST00000444553 2865 ntBASIC8.36□□□□□ -1.07
HLA-DOAP06340 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
HLA-DOAP06340 AC090771.1-201ENST00000585803 1618 ntBASIC8.36□□□□□ -1.07
HLA-DOAP06340 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC8.36□□□□□ -1.07
HLA-DOAP06340 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC8.36□□□□□ -1.07
HLA-DOAP06340 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC8.36□□□□□ -1.07
HLA-DOAP06340 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
HLA-DOAP06340 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
HLA-DOAP06340 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
HLA-DOAP06340 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
HLA-DOAP06340 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
HLA-DOAP06340 CCDC150P1-201ENST00000537123 2215 ntBASIC8.36□□□□□ -1.07
HLA-DOAP06340 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
HLA-DOAP06340 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC8.36□□□□□ -1.07
HLA-DOAP06340 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
HLA-DOAP06340 ARSFP1-201ENST00000398758 477 ntBASIC8.36□□□□□ -1.07
HLA-DOAP06340 RPLP1P10-201ENST00000413972 339 ntBASIC8.36□□□□□ -1.07
HLA-DOAP06340 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC8.36□□□□□ -1.07
HLA-DOAP06340 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC8.36□□□□□ -1.07
HLA-DOAP06340 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC8.36□□□□□ -1.07
HLA-DOAP06340 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC8.36□□□□□ -1.07
HLA-DOAP06340 AC074386.1-206ENST00000487102 761 ntBASIC8.36□□□□□ -1.07
HLA-DOAP06340 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC8.36□□□□□ -1.07
HLA-DOAP06340 SAA3P-201ENST00000533267 365 ntBASIC8.36□□□□□ -1.07
HLA-DOAP06340 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC8.36□□□□□ -1.07
HLA-DOAP06340 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC8.36□□□□□ -1.07
HLA-DOAP06340 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC8.36□□□□□ -1.07
HLA-DOAP06340 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
HLA-DOAP06340 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC8.36□□□□□ -1.07
HLA-DOAP06340 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
HLA-DOAP06340 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
HLA-DOAP06340 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
HLA-DOAP06340 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
HLA-DOAP06340 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
HLA-DOAP06340 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
HLA-DOAP06340 GINS4-209ENST00000523277 3873 ntTSL 5 BASIC8.36□□□□□ -1.07
HLA-DOAP06340 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
HLA-DOAP06340 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
HLA-DOAP06340 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
HLA-DOAP06340 SAMMSON-222ENST00000641901 2727 ntBASIC8.36□□□□□ -1.07
HLA-DOAP06340 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
HLA-DOAP06340 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
HLA-DOAP06340 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC8.36□□□□□ -1.07
HLA-DOAP06340 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HLA-DOAP06340 ERVV-1-201ENST00000602168 2202 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
HLA-DOAP06340 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HLA-DOAP06340 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC8.35□□□□□ -1.07
HLA-DOAP06340 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
HLA-DOAP06340 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HLA-DOAP06340 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HLA-DOAP06340 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC8.35□□□□□ -1.07
HLA-DOAP06340 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HLA-DOAP06340 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HLA-DOAP06340 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HLA-DOAP06340 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HLA-DOAP06340 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC8.35□□□□□ -1.07
HLA-DOAP06340 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HLA-DOAP06340 TMSB15B-208ENST00000620307 2286 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HLA-DOAP06340 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
HLA-DOAP06340 PRNCR1-201ENST00000635449 12727 ntBASIC8.35□□□□□ -1.07
HLA-DOAP06340 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC8.35□□□□□ -1.07
HLA-DOAP06340 VN1R66P-201ENST00000412929 916 ntBASIC8.35□□□□□ -1.07
HLA-DOAP06340 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HLA-DOAP06340 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HLA-DOAP06340 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC8.35□□□□□ -1.07
HLA-DOAP06340 AC013403.1-201ENST00000436954 263 ntBASIC8.35□□□□□ -1.07
HLA-DOAP06340 WDR82P2-201ENST00000444540 928 ntBASIC8.35□□□□□ -1.07
HLA-DOAP06340 SDHCP3-201ENST00000445371 506 ntBASIC8.35□□□□□ -1.07
HLA-DOAP06340 AL354714.5-201ENST00000450131 590 ntBASIC8.35□□□□□ -1.07
HLA-DOAP06340 RPL31P11-202ENST00000454082 372 ntBASIC8.35□□□□□ -1.07
HLA-DOAP06340 AL096803.1-201ENST00000456921 1021 ntBASIC8.35□□□□□ -1.07
HLA-DOAP06340 RPS26P11-201ENST00000463445 348 ntBASIC8.35□□□□□ -1.07
HLA-DOAP06340 GLRXP3-201ENST00000470810 321 ntBASIC8.35□□□□□ -1.07
HLA-DOAP06340 RPS26P6-201ENST00000475156 348 ntBASIC8.35□□□□□ -1.07
HLA-DOAP06340 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC8.35□□□□□ -1.07
HLA-DOAP06340 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
HLA-DOAP06340 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC8.35□□□□□ -1.07
HLA-DOAP06340 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms