Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB11Q9Y5F2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB11Q9Y5F2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB11Q9Y5F2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.58■□□□□ 0.72
PCDHB11Q9Y5F2 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB11Q9Y5F2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB11Q9Y5F2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB11Q9Y5F2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB11Q9Y5F2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB11Q9Y5F2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB11Q9Y5F2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB11Q9Y5F2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHB11Q9Y5F2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB11Q9Y5F2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB11Q9Y5F2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHB11Q9Y5F2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB11Q9Y5F2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB11Q9Y5F2 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHB11Q9Y5F2 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHB11Q9Y5F2 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB11Q9Y5F2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB11Q9Y5F2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PCDHB11Q9Y5F2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHB11Q9Y5F2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB11Q9Y5F2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
PCDHB11Q9Y5F2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB11Q9Y5F2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PCDHB11Q9Y5F2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB11Q9Y5F2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHB11Q9Y5F2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PCDHB11Q9Y5F2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB11Q9Y5F2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB11Q9Y5F2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB11Q9Y5F2 AC092720.2-201ENST00000602388 1665 ntBASIC19.56■□□□□ 0.72
PCDHB11Q9Y5F2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB11Q9Y5F2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB11Q9Y5F2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHB11Q9Y5F2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB11Q9Y5F2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHB11Q9Y5F2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PCDHB11Q9Y5F2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHB11Q9Y5F2 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.56■□□□□ 0.72
PCDHB11Q9Y5F2 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.56■□□□□ 0.72
PCDHB11Q9Y5F2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHB11Q9Y5F2 C2orf69P4-201ENST00000565394 541 ntBASIC19.56■□□□□ 0.72
PCDHB11Q9Y5F2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHB11Q9Y5F2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.56■□□□□ 0.72
PCDHB11Q9Y5F2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PCDHB11Q9Y5F2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB11Q9Y5F2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB11Q9Y5F2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PCDHB11Q9Y5F2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB11Q9Y5F2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
PCDHB11Q9Y5F2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB11Q9Y5F2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB11Q9Y5F2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB11Q9Y5F2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHB11Q9Y5F2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
PCDHB11Q9Y5F2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB11Q9Y5F2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB11Q9Y5F2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PCDHB11Q9Y5F2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHB11Q9Y5F2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB11Q9Y5F2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHB11Q9Y5F2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB11Q9Y5F2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHB11Q9Y5F2 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.55■□□□□ 0.72
PCDHB11Q9Y5F2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHB11Q9Y5F2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB11Q9Y5F2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB11Q9Y5F2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB11Q9Y5F2 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHB11Q9Y5F2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
PCDHB11Q9Y5F2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
PCDHB11Q9Y5F2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHB11Q9Y5F2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB11Q9Y5F2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHB11Q9Y5F2 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PCDHB11Q9Y5F2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PCDHB11Q9Y5F2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB11Q9Y5F2 RN7SL471P-201ENST00000580476 299 ntBASIC19.54■□□□□ 0.72
PCDHB11Q9Y5F2 MIR4497-201ENST00000583208 89 ntBASIC19.54■□□□□ 0.72
PCDHB11Q9Y5F2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.54■□□□□ 0.72
PCDHB11Q9Y5F2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHB11Q9Y5F2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.54■□□□□ 0.72
PCDHB11Q9Y5F2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB11Q9Y5F2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHB11Q9Y5F2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB11Q9Y5F2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB11Q9Y5F2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PCDHB11Q9Y5F2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHB11Q9Y5F2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHB11Q9Y5F2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB11Q9Y5F2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHB11Q9Y5F2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHB11Q9Y5F2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHB11Q9Y5F2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB11Q9Y5F2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms