Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.05■□□□□ 0.8
PKP3Q9Y446 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PKP3Q9Y446 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.05■□□□□ 0.8
PKP3Q9Y446 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PKP3Q9Y446 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PKP3Q9Y446 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.05■□□□□ 0.8
PKP3Q9Y446 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.05■□□□□ 0.8
PKP3Q9Y446 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.05■□□□□ 0.8
PKP3Q9Y446 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.05■□□□□ 0.8
PKP3Q9Y446 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PKP3Q9Y446 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PKP3Q9Y446 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PKP3Q9Y446 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PKP3Q9Y446 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PKP3Q9Y446 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PKP3Q9Y446 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PKP3Q9Y446 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.05■□□□□ 0.8
PKP3Q9Y446 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
PKP3Q9Y446 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PKP3Q9Y446 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PKP3Q9Y446 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.04■□□□□ 0.8
PKP3Q9Y446 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
PKP3Q9Y446 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.04■□□□□ 0.8
PKP3Q9Y446 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PKP3Q9Y446 AL390719.1-204ENST00000412397 1219 ntBASIC20.04■□□□□ 0.8
PKP3Q9Y446 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.04■□□□□ 0.8
PKP3Q9Y446 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.04■□□□□ 0.8
PKP3Q9Y446 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.04■□□□□ 0.8
PKP3Q9Y446 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.04■□□□□ 0.8
PKP3Q9Y446 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PKP3Q9Y446 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PKP3Q9Y446 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.04■□□□□ 0.8
PKP3Q9Y446 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PKP3Q9Y446 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.04■□□□□ 0.8
PKP3Q9Y446 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PKP3Q9Y446 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PKP3Q9Y446 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PKP3Q9Y446 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.04■□□□□ 0.8
PKP3Q9Y446 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.04■□□□□ 0.8
PKP3Q9Y446 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PKP3Q9Y446 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PKP3Q9Y446 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PKP3Q9Y446 AC099778.1-201ENST00000568593 1911 ntBASIC20.04■□□□□ 0.8
PKP3Q9Y446 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PKP3Q9Y446 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PKP3Q9Y446 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PKP3Q9Y446 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.03■□□□□ 0.8
PKP3Q9Y446 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PKP3Q9Y446 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PKP3Q9Y446 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PKP3Q9Y446 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PKP3Q9Y446 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.03■□□□□ 0.8
PKP3Q9Y446 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.03■□□□□ 0.8
PKP3Q9Y446 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PKP3Q9Y446 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PKP3Q9Y446 AC083880.1-201ENST00000608266 535 ntBASIC20.03■□□□□ 0.8
PKP3Q9Y446 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PKP3Q9Y446 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PKP3Q9Y446 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.03■□□□□ 0.8
PKP3Q9Y446 AL391422.3-201ENST00000603791 2761 ntBASIC20.03■□□□□ 0.8
PKP3Q9Y446 KRT16P6-202ENST00000425692 1426 ntBASIC20.02■□□□□ 0.8
PKP3Q9Y446 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PKP3Q9Y446 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PKP3Q9Y446 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
PKP3Q9Y446 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.02■□□□□ 0.8
PKP3Q9Y446 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PKP3Q9Y446 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PKP3Q9Y446 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PKP3Q9Y446 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PKP3Q9Y446 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PKP3Q9Y446 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.02■□□□□ 0.8
PKP3Q9Y446 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.02■□□□□ 0.8
PKP3Q9Y446 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.02■□□□□ 0.8
PKP3Q9Y446 HLA-B-256ENST00000639848 1089 ntBASIC20.02■□□□□ 0.8
PKP3Q9Y446 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
PKP3Q9Y446 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PKP3Q9Y446 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PKP3Q9Y446 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PKP3Q9Y446 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PKP3Q9Y446 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PKP3Q9Y446 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PKP3Q9Y446 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.02■□□□□ 0.8
PKP3Q9Y446 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PKP3Q9Y446 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.02■□□□□ 0.79
PKP3Q9Y446 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PKP3Q9Y446 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PKP3Q9Y446 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PKP3Q9Y446 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
PKP3Q9Y446 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PKP3Q9Y446 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PKP3Q9Y446 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PKP3Q9Y446 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PKP3Q9Y446 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PKP3Q9Y446 BX119927.1-201ENST00000636596 1552 ntBASIC20.01■□□□□ 0.79
PKP3Q9Y446 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PKP3Q9Y446 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.01■□□□□ 0.79
PKP3Q9Y446 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PKP3Q9Y446 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.01■□□□□ 0.79
PKP3Q9Y446 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.01■□□□□ 0.79
PKP3Q9Y446 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms