Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.17■□□□□ 0.34
MRPS28Q9Y2Q9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
MRPS28Q9Y2Q9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MRPS28Q9Y2Q9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MRPS28Q9Y2Q9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MRPS28Q9Y2Q9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.17■□□□□ 0.34
MRPS28Q9Y2Q9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.17■□□□□ 0.34
MRPS28Q9Y2Q9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MRPS28Q9Y2Q9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
MRPS28Q9Y2Q9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MRPS28Q9Y2Q9 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
MRPS28Q9Y2Q9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MRPS28Q9Y2Q9 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
MRPS28Q9Y2Q9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MRPS28Q9Y2Q9 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.17■□□□□ 0.34
MRPS28Q9Y2Q9 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MRPS28Q9Y2Q9 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.17■□□□□ 0.34
MRPS28Q9Y2Q9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.17■□□□□ 0.34
MRPS28Q9Y2Q9 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MRPS28Q9Y2Q9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MRPS28Q9Y2Q9 UBE2DNL-204ENST00000602536 740 ntBASIC17.17■□□□□ 0.34
MRPS28Q9Y2Q9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.17■□□□□ 0.34
MRPS28Q9Y2Q9 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.17■□□□□ 0.34
MRPS28Q9Y2Q9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MRPS28Q9Y2Q9 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.17■□□□□ 0.34
MRPS28Q9Y2Q9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MRPS28Q9Y2Q9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MRPS28Q9Y2Q9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.17■□□□□ 0.34
MRPS28Q9Y2Q9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
MRPS28Q9Y2Q9 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 MYCNOS-205ENST00000641950 531 ntBASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 TREX1-205ENST00000625293 1783 ntBASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
MRPS28Q9Y2Q9 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.14■□□□□ 0.33
MRPS28Q9Y2Q9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.14■□□□□ 0.33
MRPS28Q9Y2Q9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.14■□□□□ 0.33
MRPS28Q9Y2Q9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MRPS28Q9Y2Q9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms