Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF6Q9Y252 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF6Q9Y252 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF6Q9Y252 AC116562.4-201ENST00000641316 2276 ntBASIC18.76■□□□□ 0.59
RNF6Q9Y252 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF6Q9Y252 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF6Q9Y252 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF6Q9Y252 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RNF6Q9Y252 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF6Q9Y252 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF6Q9Y252 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF6Q9Y252 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.76■□□□□ 0.59
RNF6Q9Y252 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF6Q9Y252 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF6Q9Y252 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.76■□□□□ 0.59
RNF6Q9Y252 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
RNF6Q9Y252 AC069236.1-201ENST00000604339 616 ntBASIC18.76■□□□□ 0.59
RNF6Q9Y252 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF6Q9Y252 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF6Q9Y252 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF6Q9Y252 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF6Q9Y252 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF6Q9Y252 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF6Q9Y252 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RNF6Q9Y252 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF6Q9Y252 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF6Q9Y252 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF6Q9Y252 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
RNF6Q9Y252 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RNF6Q9Y252 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF6Q9Y252 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF6Q9Y252 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RNF6Q9Y252 AC093787.1-201ENST00000450396 207 ntBASIC18.75■□□□□ 0.59
RNF6Q9Y252 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF6Q9Y252 RNA5SP413-201ENST00000516373 109 ntBASIC18.75■□□□□ 0.59
RNF6Q9Y252 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.75■□□□□ 0.59
RNF6Q9Y252 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF6Q9Y252 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF6Q9Y252 AC016405.3-201ENST00000607710 860 ntBASIC18.75■□□□□ 0.59
RNF6Q9Y252 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF6Q9Y252 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RNF6Q9Y252 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF6Q9Y252 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RNF6Q9Y252 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF6Q9Y252 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF6Q9Y252 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RNF6Q9Y252 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF6Q9Y252 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF6Q9Y252 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF6Q9Y252 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF6Q9Y252 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF6Q9Y252 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF6Q9Y252 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RNF6Q9Y252 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF6Q9Y252 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF6Q9Y252 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF6Q9Y252 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF6Q9Y252 AL512625.2-201ENST00000417533 625 ntBASIC18.74■□□□□ 0.59
RNF6Q9Y252 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF6Q9Y252 POU5F1P3-201ENST00000428824 1078 ntBASIC18.74■□□□□ 0.59
RNF6Q9Y252 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF6Q9Y252 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF6Q9Y252 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RNF6Q9Y252 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RNF6Q9Y252 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF6Q9Y252 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF6Q9Y252 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF6Q9Y252 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF6Q9Y252 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.73■□□□□ 0.59
RNF6Q9Y252 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF6Q9Y252 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF6Q9Y252 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF6Q9Y252 BX323043.1-201ENST00000641006 1765 ntBASIC18.73■□□□□ 0.59
RNF6Q9Y252 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RNF6Q9Y252 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF6Q9Y252 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
RNF6Q9Y252 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RNF6Q9Y252 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
RNF6Q9Y252 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF6Q9Y252 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF6Q9Y252 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF6Q9Y252 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF6Q9Y252 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF6Q9Y252 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.73■□□□□ 0.59
RNF6Q9Y252 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF6Q9Y252 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF6Q9Y252 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF6Q9Y252 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.73■□□□□ 0.59
RNF6Q9Y252 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF6Q9Y252 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF6Q9Y252 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF6Q9Y252 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF6Q9Y252 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF6Q9Y252 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF6Q9Y252 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF6Q9Y252 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF6Q9Y252 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
RNF6Q9Y252 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.73■□□□□ 0.59
RNF6Q9Y252 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF6Q9Y252 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms