Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.58□□□□□ -0.08
HHLA3Q9XRX5 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC14.58□□□□□ -0.08
HHLA3Q9XRX5 TFG-210ENST00000620299 1289 ntTSL 5 BASIC14.58□□□□□ -0.08
HHLA3Q9XRX5 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HHLA3Q9XRX5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HHLA3Q9XRX5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HHLA3Q9XRX5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HHLA3Q9XRX5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HHLA3Q9XRX5 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HHLA3Q9XRX5 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HHLA3Q9XRX5 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.58□□□□□ -0.08
HHLA3Q9XRX5 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
HHLA3Q9XRX5 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC14.58□□□□□ -0.08
HHLA3Q9XRX5 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
HHLA3Q9XRX5 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HHLA3Q9XRX5 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 AC116050.2-201ENST00000612102 1779 ntBASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 AC243732.1-201ENST00000612648 864 ntBASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 RBM17P2-201ENST00000616397 1405 ntBASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HHLA3Q9XRX5 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 HSCB-202ENST00000398941 955 ntTSL 2 BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 AC125437.2-201ENST00000625180 2167 ntBASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HHLA3Q9XRX5 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HHLA3Q9XRX5 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HHLA3Q9XRX5 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.55□□□□□ -0.08
HHLA3Q9XRX5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HHLA3Q9XRX5 BID-203ENST00000399765 1879 ntTSL 2 BASIC14.55□□□□□ -0.08
HHLA3Q9XRX5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HHLA3Q9XRX5 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HHLA3Q9XRX5 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HHLA3Q9XRX5 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HHLA3Q9XRX5 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HHLA3Q9XRX5 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HHLA3Q9XRX5 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HHLA3Q9XRX5 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.55□□□□□ -0.08
HHLA3Q9XRX5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HHLA3Q9XRX5 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HHLA3Q9XRX5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.55□□□□□ -0.08
HHLA3Q9XRX5 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HHLA3Q9XRX5 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HHLA3Q9XRX5 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
HHLA3Q9XRX5 AL158211.5-201ENST00000623583 2518 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms