Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
CDK11AQ9UQ88 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC31.01■■■□□ 2.56
CDK11AQ9UQ88 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
CDK11AQ9UQ88 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC31.01■■■□□ 2.55
CDK11AQ9UQ88 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CDK11AQ9UQ88 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CDK11AQ9UQ88 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CDK11AQ9UQ88 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC31.01■■■□□ 2.55
CDK11AQ9UQ88 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC31.01■■■□□ 2.55
CDK11AQ9UQ88 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC31.01■■■□□ 2.55
CDK11AQ9UQ88 AL031985.4-201ENST00000642138 673 ntBASIC31.01■■■□□ 2.55
CDK11AQ9UQ88 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC31.01■■■□□ 2.55
CDK11AQ9UQ88 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CDK11AQ9UQ88 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC31.01■■■□□ 2.55
CDK11AQ9UQ88 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CDK11AQ9UQ88 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CDK11AQ9UQ88 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CDK11AQ9UQ88 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CDK11AQ9UQ88 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC31■■■□□ 2.55
CDK11AQ9UQ88 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
CDK11AQ9UQ88 CRAT-202ENST00000393384 973 ntTSL 2 BASIC31■■■□□ 2.55
CDK11AQ9UQ88 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC31■■■□□ 2.55
CDK11AQ9UQ88 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC31■■■□□ 2.55
CDK11AQ9UQ88 C1QL1P1-201ENST00000568105 661 ntBASIC31■■■□□ 2.55
CDK11AQ9UQ88 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CDK11AQ9UQ88 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CDK11AQ9UQ88 FBXW4P1-201ENST00000426721 2239 ntBASIC31■■■□□ 2.55
CDK11AQ9UQ88 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC30.99■■■□□ 2.55
CDK11AQ9UQ88 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CDK11AQ9UQ88 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CDK11AQ9UQ88 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CDK11AQ9UQ88 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
CDK11AQ9UQ88 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC30.99■■■□□ 2.55
CDK11AQ9UQ88 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CDK11AQ9UQ88 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC30.99■■■□□ 2.55
CDK11AQ9UQ88 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
CDK11AQ9UQ88 AC026271.3-201ENST00000571884 352 ntBASIC30.99■■■□□ 2.55
CDK11AQ9UQ88 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
CDK11AQ9UQ88 H19-201ENST00000411754 1788 ntTSL 5 BASIC30.99■■■□□ 2.55
CDK11AQ9UQ88 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC30.99■■■□□ 2.55
CDK11AQ9UQ88 AC073508.3-201ENST00000619697 1419 ntBASIC30.98■■■□□ 2.55
CDK11AQ9UQ88 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC30.98■■■□□ 2.55
CDK11AQ9UQ88 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC30.98■■■□□ 2.55
CDK11AQ9UQ88 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
CDK11AQ9UQ88 TERF1P1-201ENST00000311003 1181 ntBASIC30.98■■■□□ 2.55
CDK11AQ9UQ88 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC30.98■■■□□ 2.55
CDK11AQ9UQ88 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC30.98■■■□□ 2.55
CDK11AQ9UQ88 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC30.98■■■□□ 2.55
CDK11AQ9UQ88 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC30.98■■■□□ 2.55
CDK11AQ9UQ88 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC30.98■■■□□ 2.55
CDK11AQ9UQ88 AL117328.2-201ENST00000624617 1940 ntBASIC30.98■■■□□ 2.55
CDK11AQ9UQ88 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC30.98■■■□□ 2.55
CDK11AQ9UQ88 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC30.97■■■□□ 2.55
CDK11AQ9UQ88 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC30.97■■■□□ 2.55
CDK11AQ9UQ88 AL137013.1-201ENST00000432946 1228 ntBASIC30.97■■■□□ 2.55
CDK11AQ9UQ88 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC30.97■■■□□ 2.55
CDK11AQ9UQ88 AL445675.2-201ENST00000620291 557 ntBASIC30.97■■■□□ 2.55
CDK11AQ9UQ88 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CDK11AQ9UQ88 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC30.97■■■□□ 2.55
CDK11AQ9UQ88 AP006587.1-201ENST00000534129 1502 ntBASIC30.97■■■□□ 2.55
CDK11AQ9UQ88 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC30.97■■■□□ 2.55
CDK11AQ9UQ88 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC30.96■■■□□ 2.55
CDK11AQ9UQ88 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
CDK11AQ9UQ88 FSCN1P1-201ENST00000568912 1481 ntBASIC30.96■■■□□ 2.55
CDK11AQ9UQ88 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
CDK11AQ9UQ88 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
CDK11AQ9UQ88 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC30.96■■■□□ 2.55
CDK11AQ9UQ88 PPP1R14BP5-201ENST00000440334 435 ntBASIC30.96■■■□□ 2.55
CDK11AQ9UQ88 SLC25A3P1-201ENST00000443844 931 ntBASIC30.96■■■□□ 2.55
CDK11AQ9UQ88 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC30.96■■■□□ 2.55
CDK11AQ9UQ88 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC30.96■■■□□ 2.55
CDK11AQ9UQ88 AL121603.2-201ENST00000557373 2117 ntBASIC30.96■■■□□ 2.55
CDK11AQ9UQ88 TPM1-226ENST00000560959 925 ntTSL 2 BASIC30.96■■■□□ 2.55
CDK11AQ9UQ88 NME3-204ENST00000563498 920 ntTSL 2 BASIC30.96■■■□□ 2.55
CDK11AQ9UQ88 RMI2-205ENST00000576027 818 ntTSL 2 BASIC30.96■■■□□ 2.55
CDK11AQ9UQ88 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CDK11AQ9UQ88 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
CDK11AQ9UQ88 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
CDK11AQ9UQ88 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CDK11AQ9UQ88 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CDK11AQ9UQ88 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC30.96■■■□□ 2.55
CDK11AQ9UQ88 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CDK11AQ9UQ88 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC30.95■■■□□ 2.55
CDK11AQ9UQ88 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CDK11AQ9UQ88 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC30.95■■■□□ 2.55
CDK11AQ9UQ88 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CDK11AQ9UQ88 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CDK11AQ9UQ88 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC30.95■■■□□ 2.55
CDK11AQ9UQ88 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC30.95■■■□□ 2.55
CDK11AQ9UQ88 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
CDK11AQ9UQ88 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
CDK11AQ9UQ88 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
CDK11AQ9UQ88 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC30.94■■■□□ 2.54
CDK11AQ9UQ88 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC30.94■■■□□ 2.54
CDK11AQ9UQ88 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CDK11AQ9UQ88 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC30.94■■■□□ 2.54
CDK11AQ9UQ88 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
CDK11AQ9UQ88 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
CDK11AQ9UQ88 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC30.94■■■□□ 2.54
CDK11AQ9UQ88 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC30.94■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms