Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.27■□□□□ 0.68
SPHK1Q9NYA1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.27■□□□□ 0.68
SPHK1Q9NYA1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.27■□□□□ 0.68
SPHK1Q9NYA1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.27■□□□□ 0.68
SPHK1Q9NYA1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SPHK1Q9NYA1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SPHK1Q9NYA1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.27■□□□□ 0.67
SPHK1Q9NYA1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
SPHK1Q9NYA1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SPHK1Q9NYA1 AL162377.1-201ENST00000618844 1793 ntBASIC19.27■□□□□ 0.67
SPHK1Q9NYA1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SPHK1Q9NYA1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SPHK1Q9NYA1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPHK1Q9NYA1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SPHK1Q9NYA1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.26■□□□□ 0.67
SPHK1Q9NYA1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SPHK1Q9NYA1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPHK1Q9NYA1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SPHK1Q9NYA1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SPHK1Q9NYA1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SPHK1Q9NYA1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPHK1Q9NYA1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SPHK1Q9NYA1 AC098590.1-201ENST00000468126 897 ntBASIC19.26■□□□□ 0.67
SPHK1Q9NYA1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
SPHK1Q9NYA1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.26■□□□□ 0.67
SPHK1Q9NYA1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPHK1Q9NYA1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.26■□□□□ 0.67
SPHK1Q9NYA1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SPHK1Q9NYA1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.26■□□□□ 0.67
SPHK1Q9NYA1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.26■□□□□ 0.67
SPHK1Q9NYA1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.25■□□□□ 0.67
SPHK1Q9NYA1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SPHK1Q9NYA1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SPHK1Q9NYA1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SPHK1Q9NYA1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.25■□□□□ 0.67
SPHK1Q9NYA1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
SPHK1Q9NYA1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.25■□□□□ 0.67
SPHK1Q9NYA1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SPHK1Q9NYA1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SPHK1Q9NYA1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.25■□□□□ 0.67
SPHK1Q9NYA1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SPHK1Q9NYA1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.25■□□□□ 0.67
SPHK1Q9NYA1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SPHK1Q9NYA1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SPHK1Q9NYA1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SPHK1Q9NYA1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SPHK1Q9NYA1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SPHK1Q9NYA1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SPHK1Q9NYA1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SPHK1Q9NYA1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.25■□□□□ 0.67
SPHK1Q9NYA1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.25■□□□□ 0.67
SPHK1Q9NYA1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.25■□□□□ 0.67
SPHK1Q9NYA1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.25■□□□□ 0.67
SPHK1Q9NYA1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.25■□□□□ 0.67
SPHK1Q9NYA1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SPHK1Q9NYA1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SPHK1Q9NYA1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SPHK1Q9NYA1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.25■□□□□ 0.67
SPHK1Q9NYA1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.24■□□□□ 0.67
SPHK1Q9NYA1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
SPHK1Q9NYA1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SPHK1Q9NYA1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SPHK1Q9NYA1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.24■□□□□ 0.67
SPHK1Q9NYA1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
SPHK1Q9NYA1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.24■□□□□ 0.67
SPHK1Q9NYA1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.24■□□□□ 0.67
SPHK1Q9NYA1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SPHK1Q9NYA1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SPHK1Q9NYA1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SPHK1Q9NYA1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SPHK1Q9NYA1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SPHK1Q9NYA1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SPHK1Q9NYA1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SPHK1Q9NYA1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.24■□□□□ 0.67
SPHK1Q9NYA1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SPHK1Q9NYA1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SPHK1Q9NYA1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SPHK1Q9NYA1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.24■□□□□ 0.67
SPHK1Q9NYA1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SPHK1Q9NYA1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPHK1Q9NYA1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPHK1Q9NYA1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SPHK1Q9NYA1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SPHK1Q9NYA1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.23■□□□□ 0.67
SPHK1Q9NYA1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.23■□□□□ 0.67
SPHK1Q9NYA1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPHK1Q9NYA1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.23■□□□□ 0.67
SPHK1Q9NYA1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SPHK1Q9NYA1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
SPHK1Q9NYA1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SPHK1Q9NYA1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.23■□□□□ 0.67
SPHK1Q9NYA1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SPHK1Q9NYA1 RN7SL471P-201ENST00000580476 299 ntBASIC19.23■□□□□ 0.67
SPHK1Q9NYA1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.23■□□□□ 0.67
SPHK1Q9NYA1 MTDHP1-201ENST00000605323 784 ntBASIC19.23■□□□□ 0.67
SPHK1Q9NYA1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SPHK1Q9NYA1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.23■□□□□ 0.67
SPHK1Q9NYA1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SPHK1Q9NYA1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPHK1Q9NYA1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms