Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
GCM1Q9NP62 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
GCM1Q9NP62 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GCM1Q9NP62 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
GCM1Q9NP62 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GCM1Q9NP62 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.03■□□□□ 0.32
GCM1Q9NP62 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GCM1Q9NP62 AC092368.3-202ENST00000574180 1591 ntBASIC17.03■□□□□ 0.32
GCM1Q9NP62 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GCM1Q9NP62 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GCM1Q9NP62 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GCM1Q9NP62 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.03■□□□□ 0.32
GCM1Q9NP62 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GCM1Q9NP62 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GCM1Q9NP62 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GCM1Q9NP62 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GCM1Q9NP62 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GCM1Q9NP62 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.03■□□□□ 0.32
GCM1Q9NP62 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GCM1Q9NP62 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
GCM1Q9NP62 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.03■□□□□ 0.32
GCM1Q9NP62 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.03■□□□□ 0.32
GCM1Q9NP62 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.03■□□□□ 0.32
GCM1Q9NP62 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GCM1Q9NP62 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GCM1Q9NP62 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
GCM1Q9NP62 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GCM1Q9NP62 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GCM1Q9NP62 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GCM1Q9NP62 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GCM1Q9NP62 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
GCM1Q9NP62 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
GCM1Q9NP62 AC073314.1-201ENST00000568729 2216 ntBASIC17.02■□□□□ 0.32
GCM1Q9NP62 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GCM1Q9NP62 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.02■□□□□ 0.32
GCM1Q9NP62 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GCM1Q9NP62 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.02■□□□□ 0.32
GCM1Q9NP62 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.02■□□□□ 0.32
GCM1Q9NP62 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GCM1Q9NP62 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.02■□□□□ 0.32
GCM1Q9NP62 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
GCM1Q9NP62 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GCM1Q9NP62 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GCM1Q9NP62 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
GCM1Q9NP62 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.02■□□□□ 0.32
GCM1Q9NP62 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.02■□□□□ 0.32
GCM1Q9NP62 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.02■□□□□ 0.32
GCM1Q9NP62 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GCM1Q9NP62 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GCM1Q9NP62 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
GCM1Q9NP62 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.02■□□□□ 0.31
GCM1Q9NP62 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.02■□□□□ 0.31
GCM1Q9NP62 FEM1AP1-201ENST00000431297 1995 ntBASIC17.02■□□□□ 0.31
GCM1Q9NP62 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.02■□□□□ 0.31
GCM1Q9NP62 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
GCM1Q9NP62 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
GCM1Q9NP62 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GCM1Q9NP62 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
GCM1Q9NP62 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
GCM1Q9NP62 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.01■□□□□ 0.31
GCM1Q9NP62 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GCM1Q9NP62 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GCM1Q9NP62 DPP3P2-201ENST00000416030 1696 ntBASIC17.01■□□□□ 0.31
GCM1Q9NP62 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.01■□□□□ 0.31
GCM1Q9NP62 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GCM1Q9NP62 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GCM1Q9NP62 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
GCM1Q9NP62 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GCM1Q9NP62 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GCM1Q9NP62 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GCM1Q9NP62 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GCM1Q9NP62 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
GCM1Q9NP62 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GCM1Q9NP62 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.01■□□□□ 0.31
GCM1Q9NP62 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.01■□□□□ 0.31
GCM1Q9NP62 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.01■□□□□ 0.31
GCM1Q9NP62 PNMA6B-201ENST00000538162 1200 ntBASIC17.01■□□□□ 0.31
GCM1Q9NP62 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
GCM1Q9NP62 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GCM1Q9NP62 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GCM1Q9NP62 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
GCM1Q9NP62 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GCM1Q9NP62 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GCM1Q9NP62 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
GCM1Q9NP62 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GCM1Q9NP62 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GCM1Q9NP62 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GCM1Q9NP62 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17■□□□□ 0.31
GCM1Q9NP62 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
GCM1Q9NP62 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17■□□□□ 0.31
GCM1Q9NP62 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17■□□□□ 0.31
GCM1Q9NP62 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17■□□□□ 0.31
GCM1Q9NP62 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17■□□□□ 0.31
GCM1Q9NP62 AC020907.5-201ENST00000624372 1936 ntBASIC17■□□□□ 0.31
GCM1Q9NP62 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
GCM1Q9NP62 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
GCM1Q9NP62 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17■□□□□ 0.31
GCM1Q9NP62 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GCM1Q9NP62 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
GCM1Q9NP62 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms