Protein–RNA interactions for Protein: Q9NP31

SH2D2A, SH2 domain-containing protein 2A, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D2AQ9NP31 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.2■□□□□ 0.5
SH2D2AQ9NP31 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SH2D2AQ9NP31 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH2D2AQ9NP31 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SH2D2AQ9NP31 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SH2D2AQ9NP31 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH2D2AQ9NP31 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.2■□□□□ 0.5
SH2D2AQ9NP31 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.2■□□□□ 0.5
SH2D2AQ9NP31 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.2■□□□□ 0.5
SH2D2AQ9NP31 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
SH2D2AQ9NP31 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.2■□□□□ 0.5
SH2D2AQ9NP31 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
SH2D2AQ9NP31 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.2■□□□□ 0.5
SH2D2AQ9NP31 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.2■□□□□ 0.5
SH2D2AQ9NP31 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.2■□□□□ 0.5
SH2D2AQ9NP31 FAM197Y4-202ENST00000622692 608 ntBASIC18.2■□□□□ 0.5
SH2D2AQ9NP31 AP006294.2-201ENST00000641667 209 ntBASIC18.2■□□□□ 0.5
SH2D2AQ9NP31 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
SH2D2AQ9NP31 FEM1AP1-201ENST00000431297 1995 ntBASIC18.2■□□□□ 0.5
SH2D2AQ9NP31 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH2D2AQ9NP31 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SH2D2AQ9NP31 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SH2D2AQ9NP31 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
SH2D2AQ9NP31 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SH2D2AQ9NP31 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
SH2D2AQ9NP31 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH2D2AQ9NP31 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SH2D2AQ9NP31 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH2D2AQ9NP31 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH2D2AQ9NP31 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SH2D2AQ9NP31 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH2D2AQ9NP31 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SH2D2AQ9NP31 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.19■□□□□ 0.5
SH2D2AQ9NP31 KRASP1-201ENST00000407852 552 ntBASIC18.19■□□□□ 0.5
SH2D2AQ9NP31 KRT16P6-202ENST00000425692 1426 ntBASIC18.19■□□□□ 0.5
SH2D2AQ9NP31 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SH2D2AQ9NP31 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.19■□□□□ 0.5
SH2D2AQ9NP31 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SH2D2AQ9NP31 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
SH2D2AQ9NP31 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH2D2AQ9NP31 AC093827.2-201ENST00000512654 315 ntBASIC18.19■□□□□ 0.5
SH2D2AQ9NP31 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.19■□□□□ 0.5
SH2D2AQ9NP31 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.19■□□□□ 0.5
SH2D2AQ9NP31 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SH2D2AQ9NP31 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.19■□□□□ 0.5
SH2D2AQ9NP31 AC110285.5-201ENST00000611501 352 ntBASIC18.19■□□□□ 0.5
SH2D2AQ9NP31 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SH2D2AQ9NP31 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SH2D2AQ9NP31 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.19■□□□□ 0.5
SH2D2AQ9NP31 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.19■□□□□ 0.5
SH2D2AQ9NP31 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SH2D2AQ9NP31 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D2AQ9NP31 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D2AQ9NP31 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D2AQ9NP31 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SH2D2AQ9NP31 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
SH2D2AQ9NP31 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D2AQ9NP31 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.18■□□□□ 0.5
SH2D2AQ9NP31 AL162377.1-201ENST00000618844 1793 ntBASIC18.18■□□□□ 0.5
SH2D2AQ9NP31 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.18■□□□□ 0.5
SH2D2AQ9NP31 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D2AQ9NP31 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D2AQ9NP31 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.18■□□□□ 0.5
SH2D2AQ9NP31 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D2AQ9NP31 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.18■□□□□ 0.5
SH2D2AQ9NP31 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.18■□□□□ 0.5
SH2D2AQ9NP31 PRKY-204ENST00000533551 1019 ntBASIC18.18■□□□□ 0.5
SH2D2AQ9NP31 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.18■□□□□ 0.5
SH2D2AQ9NP31 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.18■□□□□ 0.5
SH2D2AQ9NP31 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D2AQ9NP31 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.18■□□□□ 0.5
SH2D2AQ9NP31 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.18■□□□□ 0.5
SH2D2AQ9NP31 GABARAPL3-202ENST00000624044 1851 ntBASIC18.18■□□□□ 0.5
SH2D2AQ9NP31 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.18■□□□□ 0.5
SH2D2AQ9NP31 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D2AQ9NP31 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
SH2D2AQ9NP31 BX119927.1-201ENST00000636596 1552 ntBASIC18.17■□□□□ 0.5
SH2D2AQ9NP31 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D2AQ9NP31 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D2AQ9NP31 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D2AQ9NP31 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SH2D2AQ9NP31 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D2AQ9NP31 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D2AQ9NP31 AC008550.1-201ENST00000511500 884 ntBASIC18.17■□□□□ 0.5
SH2D2AQ9NP31 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.17■□□□□ 0.5
SH2D2AQ9NP31 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.17■□□□□ 0.5
SH2D2AQ9NP31 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D2AQ9NP31 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.17■□□□□ 0.5
SH2D2AQ9NP31 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.17■□□□□ 0.5
SH2D2AQ9NP31 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.17■□□□□ 0.5
SH2D2AQ9NP31 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D2AQ9NP31 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D2AQ9NP31 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D2AQ9NP31 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D2AQ9NP31 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SH2D2AQ9NP31 AC116351.2-201ENST00000606540 1585 ntBASIC18.17■□□□□ 0.5
SH2D2AQ9NP31 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH2D2AQ9NP31 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SH2D2AQ9NP31 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SH2D2AQ9NP31 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms