Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD8Q9HCK8 AL160237.2-201ENST00000556165 472 ntBASIC18.76■□□□□ 0.59
CHD8Q9HCK8 SLC25A6P4-201ENST00000586535 553 ntBASIC18.76■□□□□ 0.59
CHD8Q9HCK8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD8Q9HCK8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.76■□□□□ 0.59
CHD8Q9HCK8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.76■□□□□ 0.59
CHD8Q9HCK8 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHD8Q9HCK8 PRSS44-201ENST00000515154 1146 ntBASIC18.76■□□□□ 0.59
CHD8Q9HCK8 AL031432.5-201ENST00000641059 760 ntBASIC18.76■□□□□ 0.59
CHD8Q9HCK8 AC116562.4-202ENST00000641738 218 ntBASIC18.76■□□□□ 0.59
CHD8Q9HCK8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHD8Q9HCK8 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CHD8Q9HCK8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD8Q9HCK8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD8Q9HCK8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.75■□□□□ 0.59
CHD8Q9HCK8 AC140113.3-201ENST00000605663 199 ntBASIC18.75■□□□□ 0.59
CHD8Q9HCK8 AL023973.1-201ENST00000624619 620 ntBASIC18.75■□□□□ 0.59
CHD8Q9HCK8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD8Q9HCK8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD8Q9HCK8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CHD8Q9HCK8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD8Q9HCK8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.75■□□□□ 0.59
CHD8Q9HCK8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.75■□□□□ 0.59
CHD8Q9HCK8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD8Q9HCK8 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD8Q9HCK8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD8Q9HCK8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHD8Q9HCK8 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.75■□□□□ 0.59
CHD8Q9HCK8 PRELID1P1-202ENST00000567272 903 ntBASIC18.75■□□□□ 0.59
CHD8Q9HCK8 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHD8Q9HCK8 SLC25A1P2-201ENST00000430693 912 ntBASIC18.74■□□□□ 0.59
CHD8Q9HCK8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHD8Q9HCK8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHD8Q9HCK8 AL662844.1-201ENST00000546340 181 ntBASIC18.74■□□□□ 0.59
CHD8Q9HCK8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
CHD8Q9HCK8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.74■□□□□ 0.59
CHD8Q9HCK8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.74■□□□□ 0.59
CHD8Q9HCK8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.74■□□□□ 0.59
CHD8Q9HCK8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.74■□□□□ 0.59
CHD8Q9HCK8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CHD8Q9HCK8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHD8Q9HCK8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHD8Q9HCK8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHD8Q9HCK8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHD8Q9HCK8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.74■□□□□ 0.59
CHD8Q9HCK8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHD8Q9HCK8 AL031008.1-201ENST00000619963 541 ntBASIC18.74■□□□□ 0.59
CHD8Q9HCK8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CHD8Q9HCK8 AC093323.1-202ENST00000635031 2045 ntBASIC18.73■□□□□ 0.59
CHD8Q9HCK8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CHD8Q9HCK8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHD8Q9HCK8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.73■□□□□ 0.59
CHD8Q9HCK8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHD8Q9HCK8 AL512604.3-201ENST00000569583 964 ntBASIC18.73■□□□□ 0.59
CHD8Q9HCK8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.73■□□□□ 0.59
CHD8Q9HCK8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHD8Q9HCK8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHD8Q9HCK8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHD8Q9HCK8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.73■□□□□ 0.59
CHD8Q9HCK8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CHD8Q9HCK8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CHD8Q9HCK8 AC120114.3-201ENST00000611923 658 ntBASIC18.73■□□□□ 0.59
CHD8Q9HCK8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CHD8Q9HCK8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHD8Q9HCK8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHD8Q9HCK8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.72■□□□□ 0.59
CHD8Q9HCK8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
CHD8Q9HCK8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.72■□□□□ 0.59
CHD8Q9HCK8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHD8Q9HCK8 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.72■□□□□ 0.59
CHD8Q9HCK8 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CHD8Q9HCK8 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.72■□□□□ 0.59
CHD8Q9HCK8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHD8Q9HCK8 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHD8Q9HCK8 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.72■□□□□ 0.59
CHD8Q9HCK8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHD8Q9HCK8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHD8Q9HCK8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHD8Q9HCK8 AC106795.1-205ENST00000512851 1056 ntBASIC18.72■□□□□ 0.59
CHD8Q9HCK8 AC023632.3-201ENST00000521633 145 ntBASIC18.72■□□□□ 0.59
CHD8Q9HCK8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.72■□□□□ 0.59
CHD8Q9HCK8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.71■□□□□ 0.59
CHD8Q9HCK8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.71■□□□□ 0.59
CHD8Q9HCK8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CHD8Q9HCK8 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.71■□□□□ 0.59
CHD8Q9HCK8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.71■□□□□ 0.59
CHD8Q9HCK8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHD8Q9HCK8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CHD8Q9HCK8 AC004951.3-201ENST00000418645 1148 ntBASIC18.71■□□□□ 0.59
CHD8Q9HCK8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CHD8Q9HCK8 KRT18P38-201ENST00000449496 1282 ntBASIC18.71■□□□□ 0.59
CHD8Q9HCK8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.71■□□□□ 0.59
CHD8Q9HCK8 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.71■□□□□ 0.59
CHD8Q9HCK8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHD8Q9HCK8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CHD8Q9HCK8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.71■□□□□ 0.59
CHD8Q9HCK8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CHD8Q9HCK8 AC096733.2-201ENST00000609937 1394 ntBASIC18.71■□□□□ 0.59
CHD8Q9HCK8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.71■□□□□ 0.59
CHD8Q9HCK8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms