Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC13.37□□□□□ -0.27
SND1-IT1Q9HBX3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SND1-IT1Q9HBX3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SND1-IT1Q9HBX3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC13.37□□□□□ -0.27
SND1-IT1Q9HBX3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
SND1-IT1Q9HBX3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 AC061975.6-201ENST00000579045 1553 ntBASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SND1-IT1Q9HBX3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SND1-IT1Q9HBX3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 EEF1DP3-203ENST00000566025 782 ntBASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SND1-IT1Q9HBX3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms