Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC40Q9H9A6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRRC40Q9H9A6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.28■□□□□ 0.84
LRRC40Q9H9A6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC40Q9H9A6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.28■□□□□ 0.84
LRRC40Q9H9A6 MKRN4P-201ENST00000444706 1521 ntBASIC20.28■□□□□ 0.84
LRRC40Q9H9A6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC40Q9H9A6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC40Q9H9A6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC40Q9H9A6 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.28■□□□□ 0.84
LRRC40Q9H9A6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC40Q9H9A6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.28■□□□□ 0.84
LRRC40Q9H9A6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.28■□□□□ 0.84
LRRC40Q9H9A6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.28■□□□□ 0.84
LRRC40Q9H9A6 LSM12P1-201ENST00000411836 588 ntBASIC20.28■□□□□ 0.84
LRRC40Q9H9A6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
LRRC40Q9H9A6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.28■□□□□ 0.84
LRRC40Q9H9A6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC40Q9H9A6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC40Q9H9A6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC40Q9H9A6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.28■□□□□ 0.84
LRRC40Q9H9A6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRC40Q9H9A6 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.28■□□□□ 0.84
LRRC40Q9H9A6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC40Q9H9A6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LRRC40Q9H9A6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.27■□□□□ 0.84
LRRC40Q9H9A6 TMEM179-206ENST00000616017 1645 ntBASIC20.27■□□□□ 0.84
LRRC40Q9H9A6 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC40Q9H9A6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC40Q9H9A6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC40Q9H9A6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LRRC40Q9H9A6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
LRRC40Q9H9A6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.27■□□□□ 0.84
LRRC40Q9H9A6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.27■□□□□ 0.84
LRRC40Q9H9A6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.27■□□□□ 0.84
LRRC40Q9H9A6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC40Q9H9A6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC40Q9H9A6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC40Q9H9A6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.27■□□□□ 0.84
LRRC40Q9H9A6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
LRRC40Q9H9A6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC40Q9H9A6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRRC40Q9H9A6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRRC40Q9H9A6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRRC40Q9H9A6 KRT16P6-202ENST00000425692 1426 ntBASIC20.27■□□□□ 0.83
LRRC40Q9H9A6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
LRRC40Q9H9A6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
LRRC40Q9H9A6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC40Q9H9A6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC40Q9H9A6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.26■□□□□ 0.83
LRRC40Q9H9A6 HLA-G-202ENST00000376815 851 ntBASIC20.26■□□□□ 0.83
LRRC40Q9H9A6 HLA-G-203ENST00000376818 1127 ntBASIC20.26■□□□□ 0.83
LRRC40Q9H9A6 CROCCP5-201ENST00000436658 830 ntBASIC20.26■□□□□ 0.83
LRRC40Q9H9A6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC40Q9H9A6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.26■□□□□ 0.83
LRRC40Q9H9A6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.26■□□□□ 0.83
LRRC40Q9H9A6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.26■□□□□ 0.83
LRRC40Q9H9A6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.26■□□□□ 0.83
LRRC40Q9H9A6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC40Q9H9A6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
LRRC40Q9H9A6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC40Q9H9A6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC40Q9H9A6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.26■□□□□ 0.83
LRRC40Q9H9A6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC40Q9H9A6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC40Q9H9A6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC40Q9H9A6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC40Q9H9A6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC40Q9H9A6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC40Q9H9A6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.25■□□□□ 0.83
LRRC40Q9H9A6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC40Q9H9A6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC40Q9H9A6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.25■□□□□ 0.83
LRRC40Q9H9A6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
LRRC40Q9H9A6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
LRRC40Q9H9A6 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.25■□□□□ 0.83
LRRC40Q9H9A6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC40Q9H9A6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.25■□□□□ 0.83
LRRC40Q9H9A6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC40Q9H9A6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.25■□□□□ 0.83
LRRC40Q9H9A6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.25■□□□□ 0.83
LRRC40Q9H9A6 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.25■□□□□ 0.83
LRRC40Q9H9A6 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.25■□□□□ 0.83
LRRC40Q9H9A6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC40Q9H9A6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC40Q9H9A6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.25■□□□□ 0.83
LRRC40Q9H9A6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC40Q9H9A6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.24■□□□□ 0.83
LRRC40Q9H9A6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC40Q9H9A6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC40Q9H9A6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRC40Q9H9A6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
LRRC40Q9H9A6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC40Q9H9A6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC40Q9H9A6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC40Q9H9A6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
LRRC40Q9H9A6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC40Q9H9A6 AC023632.3-201ENST00000521633 145 ntBASIC20.24■□□□□ 0.83
LRRC40Q9H9A6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.24■□□□□ 0.83
LRRC40Q9H9A6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms