Protein–RNA interactions for Protein: Q9H4I3

TRABD, TraB domain-containing protein, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABDQ9H4I3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
TRABDQ9H4I3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRABDQ9H4I3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.53■□□□□ 0.88
TRABDQ9H4I3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRABDQ9H4I3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.52■□□□□ 0.88
TRABDQ9H4I3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRABDQ9H4I3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.52■□□□□ 0.88
TRABDQ9H4I3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRABDQ9H4I3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.52■□□□□ 0.88
TRABDQ9H4I3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.52■□□□□ 0.88
TRABDQ9H4I3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.52■□□□□ 0.88
TRABDQ9H4I3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.52■□□□□ 0.88
TRABDQ9H4I3 MIR2861-201ENST00000636310 90 ntBASIC20.52■□□□□ 0.88
TRABDQ9H4I3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRABDQ9H4I3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRABDQ9H4I3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TRABDQ9H4I3 AC125437.2-201ENST00000625180 2167 ntBASIC20.52■□□□□ 0.88
TRABDQ9H4I3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
TRABDQ9H4I3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRABDQ9H4I3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRABDQ9H4I3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRABDQ9H4I3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.51■□□□□ 0.87
TRABDQ9H4I3 CYP21A1P-202ENST00000354927 1481 ntBASIC20.51■□□□□ 0.87
TRABDQ9H4I3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TRABDQ9H4I3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRABDQ9H4I3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.51■□□□□ 0.87
TRABDQ9H4I3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRABDQ9H4I3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TRABDQ9H4I3 MCRIP2P1-201ENST00000394346 511 ntBASIC20.51■□□□□ 0.87
TRABDQ9H4I3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRABDQ9H4I3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.51■□□□□ 0.87
TRABDQ9H4I3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRABDQ9H4I3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.51■□□□□ 0.87
TRABDQ9H4I3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
TRABDQ9H4I3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRABDQ9H4I3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.51■□□□□ 0.87
TRABDQ9H4I3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
TRABDQ9H4I3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRABDQ9H4I3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRABDQ9H4I3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRABDQ9H4I3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRABDQ9H4I3 AC018445.3-201ENST00000624177 1945 ntBASIC20.51■□□□□ 0.87
TRABDQ9H4I3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRABDQ9H4I3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.5■□□□□ 0.87
TRABDQ9H4I3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TRABDQ9H4I3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.5■□□□□ 0.87
TRABDQ9H4I3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRABDQ9H4I3 CROCCP5-201ENST00000436658 830 ntBASIC20.5■□□□□ 0.87
TRABDQ9H4I3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.5■□□□□ 0.87
TRABDQ9H4I3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRABDQ9H4I3 AC087633.2-202ENST00000565166 1439 ntBASIC20.5■□□□□ 0.87
TRABDQ9H4I3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
TRABDQ9H4I3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRABDQ9H4I3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRABDQ9H4I3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRABDQ9H4I3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.5■□□□□ 0.87
TRABDQ9H4I3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.5■□□□□ 0.87
TRABDQ9H4I3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TRABDQ9H4I3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRABDQ9H4I3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRABDQ9H4I3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
TRABDQ9H4I3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRABDQ9H4I3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.49■□□□□ 0.87
TRABDQ9H4I3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRABDQ9H4I3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRABDQ9H4I3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRABDQ9H4I3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TRABDQ9H4I3 AL158211.5-201ENST00000623583 2518 ntBASIC20.49■□□□□ 0.87
TRABDQ9H4I3 MIR663A-201ENST00000385250 93 ntBASIC20.49■□□□□ 0.87
TRABDQ9H4I3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.49■□□□□ 0.87
TRABDQ9H4I3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TRABDQ9H4I3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRABDQ9H4I3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRABDQ9H4I3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRABDQ9H4I3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRABDQ9H4I3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.49■□□□□ 0.87
TRABDQ9H4I3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRABDQ9H4I3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
TRABDQ9H4I3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.48■□□□□ 0.87
TRABDQ9H4I3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.48■□□□□ 0.87
TRABDQ9H4I3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRABDQ9H4I3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRABDQ9H4I3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRABDQ9H4I3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRABDQ9H4I3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRABDQ9H4I3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TRABDQ9H4I3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.48■□□□□ 0.87
TRABDQ9H4I3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRABDQ9H4I3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.48■□□□□ 0.87
TRABDQ9H4I3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.48■□□□□ 0.87
TRABDQ9H4I3 AC006970.2-201ENST00000450065 779 ntBASIC20.48■□□□□ 0.87
TRABDQ9H4I3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRABDQ9H4I3 AL050303.2-201ENST00000619798 666 ntBASIC20.48■□□□□ 0.87
TRABDQ9H4I3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRABDQ9H4I3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRABDQ9H4I3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRABDQ9H4I3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
TRABDQ9H4I3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRABDQ9H4I3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
TRABDQ9H4I3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms