Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDT1Q9H211 KRT16P6-202ENST00000425692 1426 ntBASIC21.69■■□□□ 1.06
CDT1Q9H211 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDT1Q9H211 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDT1Q9H211 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
CDT1Q9H211 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDT1Q9H211 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.69■■□□□ 1.06
CDT1Q9H211 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDT1Q9H211 GABARAPL3-202ENST00000624044 1851 ntBASIC21.69■■□□□ 1.06
CDT1Q9H211 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
CDT1Q9H211 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDT1Q9H211 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDT1Q9H211 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.68■■□□□ 1.06
CDT1Q9H211 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDT1Q9H211 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDT1Q9H211 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDT1Q9H211 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDT1Q9H211 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.68■■□□□ 1.06
CDT1Q9H211 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDT1Q9H211 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.68■■□□□ 1.06
CDT1Q9H211 AC093827.2-201ENST00000512654 315 ntBASIC21.68■■□□□ 1.06
CDT1Q9H211 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.68■■□□□ 1.06
CDT1Q9H211 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.68■■□□□ 1.06
CDT1Q9H211 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.68■■□□□ 1.06
CDT1Q9H211 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
CDT1Q9H211 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDT1Q9H211 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.68■■□□□ 1.06
CDT1Q9H211 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CDT1Q9H211 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CDT1Q9H211 AC092667.1-201ENST00000434301 2586 ntBASIC21.68■■□□□ 1.06
CDT1Q9H211 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDT1Q9H211 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.67■■□□□ 1.06
CDT1Q9H211 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDT1Q9H211 BX119927.1-201ENST00000636596 1552 ntBASIC21.67■■□□□ 1.06
CDT1Q9H211 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDT1Q9H211 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDT1Q9H211 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.67■■□□□ 1.06
CDT1Q9H211 UBE2SP1-201ENST00000450587 669 ntBASIC21.67■■□□□ 1.06
CDT1Q9H211 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.67■■□□□ 1.06
CDT1Q9H211 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.67■■□□□ 1.06
CDT1Q9H211 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.67■■□□□ 1.06
CDT1Q9H211 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDT1Q9H211 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDT1Q9H211 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.67■■□□□ 1.06
CDT1Q9H211 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDT1Q9H211 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.67■■□□□ 1.06
CDT1Q9H211 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDT1Q9H211 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDT1Q9H211 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CDT1Q9H211 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDT1Q9H211 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CDT1Q9H211 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.66■■□□□ 1.06
CDT1Q9H211 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.66■■□□□ 1.06
CDT1Q9H211 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDT1Q9H211 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDT1Q9H211 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDT1Q9H211 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.66■■□□□ 1.06
CDT1Q9H211 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDT1Q9H211 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.66■■□□□ 1.06
CDT1Q9H211 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CDT1Q9H211 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDT1Q9H211 PRKY-204ENST00000533551 1019 ntBASIC21.66■■□□□ 1.06
CDT1Q9H211 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.66■■□□□ 1.06
CDT1Q9H211 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.66■■□□□ 1.06
CDT1Q9H211 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.66■■□□□ 1.06
CDT1Q9H211 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDT1Q9H211 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CDT1Q9H211 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDT1Q9H211 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDT1Q9H211 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDT1Q9H211 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CDT1Q9H211 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDT1Q9H211 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.65■■□□□ 1.06
CDT1Q9H211 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.65■■□□□ 1.06
CDT1Q9H211 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.65■■□□□ 1.06
CDT1Q9H211 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.65■■□□□ 1.06
CDT1Q9H211 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDT1Q9H211 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.65■■□□□ 1.06
CDT1Q9H211 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDT1Q9H211 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CDT1Q9H211 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.65■■□□□ 1.06
CDT1Q9H211 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDT1Q9H211 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CDT1Q9H211 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDT1Q9H211 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.64■■□□□ 1.06
CDT1Q9H211 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.64■■□□□ 1.06
CDT1Q9H211 AL162377.1-201ENST00000618844 1793 ntBASIC21.64■■□□□ 1.06
CDT1Q9H211 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDT1Q9H211 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.64■■□□□ 1.05
CDT1Q9H211 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CDT1Q9H211 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDT1Q9H211 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.64■■□□□ 1.05
CDT1Q9H211 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.64■■□□□ 1.05
CDT1Q9H211 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
CDT1Q9H211 AC110285.5-201ENST00000611501 352 ntBASIC21.64■■□□□ 1.05
CDT1Q9H211 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDT1Q9H211 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.64■■□□□ 1.05
CDT1Q9H211 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.64■■□□□ 1.05
CDT1Q9H211 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDT1Q9H211 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms