Protein–RNA interactions for Protein: Q9H204

MED28, Mediator of RNA polymerase II transcription subunit 28, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED28Q9H204 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.03■□□□□ 0.32
MED28Q9H204 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
MED28Q9H204 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
MED28Q9H204 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.03■□□□□ 0.32
MED28Q9H204 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MED28Q9H204 ABHD17AP4-201ENST00000411545 909 ntBASIC17.03■□□□□ 0.32
MED28Q9H204 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MED28Q9H204 Z92544.1-202ENST00000571933 1220 ntBASIC17.03■□□□□ 0.32
MED28Q9H204 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.03■□□□□ 0.32
MED28Q9H204 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.03■□□□□ 0.32
MED28Q9H204 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MED28Q9H204 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MED28Q9H204 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.03■□□□□ 0.32
MED28Q9H204 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
MED28Q9H204 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MED28Q9H204 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MED28Q9H204 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MED28Q9H204 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
MED28Q9H204 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.02■□□□□ 0.32
MED28Q9H204 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MED28Q9H204 AC104581.1-202ENST00000635932 2618 ntBASIC17.02■□□□□ 0.32
MED28Q9H204 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.02■□□□□ 0.32
MED28Q9H204 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.02■□□□□ 0.32
MED28Q9H204 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
MED28Q9H204 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
MED28Q9H204 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.02■□□□□ 0.32
MED28Q9H204 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
MED28Q9H204 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.02■□□□□ 0.32
MED28Q9H204 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.02■□□□□ 0.32
MED28Q9H204 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
MED28Q9H204 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MED28Q9H204 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.02■□□□□ 0.31
MED28Q9H204 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MED28Q9H204 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
MED28Q9H204 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MED28Q9H204 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MED28Q9H204 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MED28Q9H204 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
MED28Q9H204 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MED28Q9H204 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
MED28Q9H204 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MED28Q9H204 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.01■□□□□ 0.31
MED28Q9H204 AC135050.7-201ENST00000624508 2218 ntBASIC17.01■□□□□ 0.31
MED28Q9H204 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.01■□□□□ 0.31
MED28Q9H204 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.01■□□□□ 0.31
MED28Q9H204 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
MED28Q9H204 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MED28Q9H204 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.01■□□□□ 0.31
MED28Q9H204 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MED28Q9H204 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.01■□□□□ 0.31
MED28Q9H204 AL451085.2-201ENST00000605085 799 ntBASIC17.01■□□□□ 0.31
MED28Q9H204 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MED28Q9H204 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MED28Q9H204 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.01■□□□□ 0.31
MED28Q9H204 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MED28Q9H204 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
MED28Q9H204 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
MED28Q9H204 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MED28Q9H204 NOC2LP1-202ENST00000452600 2235 ntBASIC17.01■□□□□ 0.31
MED28Q9H204 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.01■□□□□ 0.31
MED28Q9H204 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
MED28Q9H204 AC133637.1-201ENST00000624115 1537 ntBASIC17.01■□□□□ 0.31
MED28Q9H204 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.01■□□□□ 0.31
MED28Q9H204 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MED28Q9H204 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MED28Q9H204 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
MED28Q9H204 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
MED28Q9H204 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17■□□□□ 0.31
MED28Q9H204 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17■□□□□ 0.31
MED28Q9H204 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17■□□□□ 0.31
MED28Q9H204 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17■□□□□ 0.31
MED28Q9H204 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MED28Q9H204 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17■□□□□ 0.31
MED28Q9H204 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17■□□□□ 0.31
MED28Q9H204 AL691432.2-201ENST00000607222 2038 ntBASIC17■□□□□ 0.31
MED28Q9H204 AC129492.7-201ENST00000622992 756 ntBASIC17■□□□□ 0.31
MED28Q9H204 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
MED28Q9H204 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17■□□□□ 0.31
MED28Q9H204 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
MED28Q9H204 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17■□□□□ 0.31
MED28Q9H204 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
MED28Q9H204 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17■□□□□ 0.31
MED28Q9H204 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
MED28Q9H204 BX005040.4-201ENST00000637145 1518 ntBASIC17■□□□□ 0.31
MED28Q9H204 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MED28Q9H204 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
MED28Q9H204 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
MED28Q9H204 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MED28Q9H204 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MED28Q9H204 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MED28Q9H204 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.99■□□□□ 0.31
MED28Q9H204 AC009113.1-201ENST00000570267 2443 ntBASIC16.99■□□□□ 0.31
MED28Q9H204 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
MED28Q9H204 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MED28Q9H204 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.99■□□□□ 0.31
MED28Q9H204 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MED28Q9H204 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
MED28Q9H204 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.99■□□□□ 0.31
MED28Q9H204 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
MED28Q9H204 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms