Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 TRY2P-201ENST00000448860 689 ntBASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 RN7SKP135-201ENST00000516549 247 ntBASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 OR4K16P-201ENST00000554603 969 ntBASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 AC107241.1-201ENST00000560280 434 ntTSL 3 BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 AC095057.3-201ENST00000567102 1157 ntBASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 AL121834.1-201ENST00000572284 509 ntBASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 CR589904.2-201ENST00000612533 440 ntBASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 AC024595.1-201ENST00000623088 387 ntBASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 CPB1-201ENST00000282957 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 TRIM64DP-201ENST00000529289 1342 ntBASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 RNASE4-202ENST00000555597 1341 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 SRGN-201ENST00000242465 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 NDUFB5-201ENST00000259037 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 AC013429.2-201ENST00000418798 781 ntBASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 AL512637.2-201ENST00000431287 1256 ntBASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 RPL5P9-201ENST00000448118 886 ntBASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 AC093719.1-201ENST00000480427 441 ntBASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 AC116562.1-201ENST00000485355 781 ntBASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 RPL7P41-201ENST00000485823 957 ntBASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 NAMPTP2-201ENST00000505629 1115 ntBASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 AC023825.1-201ENST00000566704 1030 ntBASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 AC103987.3-201ENST00000582071 292 ntBASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 AC100830.3-201ENST00000583044 554 ntBASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 AL713998.2-201ENST00000604538 1198 ntBASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 AC007161.2-201ENST00000604734 1109 ntBASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 AC011374.2-201ENST00000607135 526 ntBASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 AC139887.4-201ENST00000607877 719 ntBASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 AL121845.4-201ENST00000613401 306 ntBASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 AC010320.5-201ENST00000619124 676 ntBASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KRTAP3-3Q9BYR6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 AC145676.1-201ENST00000514988 2004 ntBASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 ZNF826P-204ENST00000597334 1446 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 SGO1P1-201ENST00000603525 1447 ntBASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 TTTY14-201ENST00000324446 1495 ntTSL 2 BASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 FAM86B2-201ENST00000262365 1268 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 SPRR3-201ENST00000295367 878 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 Y_RNA.201-201ENST00000364052 96 ntBASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 AC112907.1-201ENST00000434957 540 ntTSL 4 BASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 AC084290.1-201ENST00000434995 374 ntBASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 LINC00674-201ENST00000435469 678 ntTSL 3 BASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 AC046143.1-201ENST00000447139 972 ntTSL 2 BASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 ANAPC10-209ENST00000507656 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 NPM1P50-201ENST00000532878 867 ntBASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 AC133540.1-201ENST00000620845 1019 ntBASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 AL138955.1-201ENST00000622881 1040 ntBASIC12.3□□□□□ -0.44
KRTAP3-3Q9BYR6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms