Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2Q9BSQ5 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CCM2Q9BSQ5 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CCM2Q9BSQ5 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2Q9BSQ5 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.66■□□□□ 0.74
CCM2Q9BSQ5 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2Q9BSQ5 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2Q9BSQ5 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2Q9BSQ5 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2Q9BSQ5 KRT16P6-202ENST00000425692 1426 ntBASIC19.66■□□□□ 0.74
CCM2Q9BSQ5 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2Q9BSQ5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2Q9BSQ5 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2Q9BSQ5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2Q9BSQ5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.66■□□□□ 0.74
CCM2Q9BSQ5 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.65■□□□□ 0.74
CCM2Q9BSQ5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCM2Q9BSQ5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCM2Q9BSQ5 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCM2Q9BSQ5 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCM2Q9BSQ5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCM2Q9BSQ5 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CCM2Q9BSQ5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.65■□□□□ 0.74
CCM2Q9BSQ5 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCM2Q9BSQ5 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCM2Q9BSQ5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCM2Q9BSQ5 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCM2Q9BSQ5 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.65■□□□□ 0.74
CCM2Q9BSQ5 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCM2Q9BSQ5 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.65■□□□□ 0.74
CCM2Q9BSQ5 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.65■□□□□ 0.74
CCM2Q9BSQ5 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCM2Q9BSQ5 SOX15-203ENST00000570788 1093 ntBASIC19.65■□□□□ 0.74
CCM2Q9BSQ5 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.65■□□□□ 0.74
CCM2Q9BSQ5 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCM2Q9BSQ5 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCM2Q9BSQ5 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCM2Q9BSQ5 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCM2Q9BSQ5 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCM2Q9BSQ5 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.65■□□□□ 0.74
CCM2Q9BSQ5 BX119927.1-201ENST00000636596 1552 ntBASIC19.65■□□□□ 0.74
CCM2Q9BSQ5 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCM2Q9BSQ5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCM2Q9BSQ5 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
CCM2Q9BSQ5 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCM2Q9BSQ5 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.64■□□□□ 0.73
CCM2Q9BSQ5 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CCM2Q9BSQ5 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCM2Q9BSQ5 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.73
CCM2Q9BSQ5 UNC93B4-201ENST00000505679 747 ntBASIC19.64■□□□□ 0.73
CCM2Q9BSQ5 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.64■□□□□ 0.73
CCM2Q9BSQ5 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
CCM2Q9BSQ5 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCM2Q9BSQ5 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCM2Q9BSQ5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CCM2Q9BSQ5 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.64■□□□□ 0.73
CCM2Q9BSQ5 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCM2Q9BSQ5 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.64■□□□□ 0.73
CCM2Q9BSQ5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CCM2Q9BSQ5 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
CCM2Q9BSQ5 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCM2Q9BSQ5 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCM2Q9BSQ5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCM2Q9BSQ5 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCM2Q9BSQ5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCM2Q9BSQ5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 AC026366.1-201ENST00000488803 879 ntBASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 AP003097.1-201ENST00000530657 1135 ntBASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCM2Q9BSQ5 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms